Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3439 |
Symbol | |
ID | 5077588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 41088 |
End bp | 41801 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640481163 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001165825 |
Protein GI | 146275665 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATC GCCTGTCCGG CAAGGTCGCG GTCGTCACCG GCGCTGCGGC GGGCATCGGC AAGGGCTGCG CCCGCATTTT CCGCGAGGAG GGAGCCGCCG TCATCGGCGT CGATCTTGCA GGGGCGGACC GCGCCTGCGA CCTGACCGAC GAGACGCAGG TTTCAGCGCT GTTCGCCGCG ATCGTGGCCG AGCACGGCAG GATCGACGTG CTTGTGAACG CCGCCGCCTT TGCGGTCTTC GCGTGGATCG AGGAAATGAC CCTTGCGGAG TGGCGGCGCA CGCTGACCGG CGAACTCGAC ACCGTTTTCC TGCCGACGCG CGCGGCCTGG GCGGGCCTCA AGGCCAGCGG CGCTGCCAGC GTGATCAACT TCGCCAGCGC CAACGCGCGC CACGCGCTCG ACGGTTCGGC CGCGCTCGCG CATTGCGCGG GCAAGGGCGG CGTCCTTGCG ATGACGCGGC AGCTCGCGAT GGAAGGTGCC CCTCACGGCA TCCGCGCCAA CTCGATCTCT CCGGGCTTCA TCCGCACCGA GGCGACGGGA CGCCACCTTG CCGAAGTCCC GGACCTGCGC GACCGGGTCC TTGCCAAGAA CATGGTCAAA CGCCTTGGCG AGCCTGAAGA CATCGCGTGG TGCGCCACAT GGCTCGCCAG CGACGAGGCC CGCTATGTCA CCGGGGCCGA CATTGCCGTG GATGGGGGCG CGACGGCCTG GTAG
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Protein sequence | MPDRLSGKVA VVTGAAAGIG KGCARIFREE GAAVIGVDLA GADRACDLTD ETQVSALFAA IVAEHGRIDV LVNAAAFAVF AWIEEMTLAE WRRTLTGELD TVFLPTRAAW AGLKASGAAS VINFASANAR HALDGSAALA HCAGKGGVLA MTRQLAMEGA PHGIRANSIS PGFIRTEATG RHLAEVPDLR DRVLAKNMVK RLGEPEDIAW CATWLASDEA RYVTGADIAV DGGATAW
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