Gene Saro_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3425 
Symbol 
ID5077574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp25710 
End bp26873 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID640481149 
Producthypothetical protein 
Protein accessionYP_001165811 
Protein GI146275651 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.4734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAC CCTTCCCCGG AAACTACGTC TGGAACCTTG GCATCAACCT TGCGCTGATC 
GCGGGCGGGA ACCATGGCGA ACTAGACGAG GTCTGCCGCC CGGTGCGCGA AGCGGCCAAG
GCCGGCGCCG ATGCCGGTTC CGCGCTTCTG TTCGATAGCT GGATCGCGGT GGCCGACCAG
GTCACCCGGA ATGCCGAACG GGACGAGGCC GAGGGCTTCC TCCTGTCAGC CGGAGCCAAG
TACCTGCGCG CCTCGGGCTA TTACCTCGGC GCGGAACGGC TCCAGAGCCG CGACTATGCC
CCGCGCTGGG TGGCCTACGA CAAGGGCCTC GAACTCTATC ACAAGGGCAG CGCGCTTTCC
GGGCTCCATG TCGACAAGGT CGAGATTCCC TACGAGGGTT CGAGCTATCC CGCGATCTTC
GTCCACGACG GATCGGGCAC GCCGCGCCCG ACGCTGGTTT CGGTCAACGG TCTCGATTCG
ATGAAGGAAC AGGTCAACAT GGCCGGCCAC GGCGCGGTCA ACCTCGCGCG GGGCATGAAC
ACGCTGTTTC TTGACCAGCC CGGCACCGGC GAGGCGATCC GCAAGCGCAA CCTGCCCGCG
GTCTTCGACG CGGAACGCTG GGGCAGCCCG GCCTTCGACT ACCTGCTTAC CCGCAGCGAC
GTGATCCATT CGCAGATCGG CATCTTCGGC CTATCGTTCG GCGGCTACCA CGCCCCGCGC
ATCGCCGCGA ACGACCCGCG CTATGCACTT TGCGCCGTCA TGGGCGCCAA CCACGTCTGG
GGCCAGCGCC AGCGCGAACG CGTCGCCAAC GAGGGCGAGA ACCCAGTGCC GCACTACTGG
GATCACGTCA TGTGGGTCTT CGGGATAGAC GACCAGGCGG CCTTCCTCGA ATATGCCGAC
CAGATCACGC TGGACGGGCA GGTAGAGAAG ATCCGCGTGC CGTTCCTCAT CACCCACGGC
GAGAACGACC GCCAGATTCC GGCCTACAAC GCGCAGATGA GCTACGACCA GGCAGTGAAC
AGTCCCAAGC GCACCCTGCG CATCTTCACC CGGGCCGATT TCGAGGTGGA GCATTGCGGC
GCCGACAACG GCACCGGCAT GCGCGACTAC ATCGCCGACT GGTGCGCACA GACCTTTGCC
GAGATGGCCG GGAACAAGGG CTGA
 
Protein sequence
MFEPFPGNYV WNLGINLALI AGGNHGELDE VCRPVREAAK AGADAGSALL FDSWIAVADQ 
VTRNAERDEA EGFLLSAGAK YLRASGYYLG AERLQSRDYA PRWVAYDKGL ELYHKGSALS
GLHVDKVEIP YEGSSYPAIF VHDGSGTPRP TLVSVNGLDS MKEQVNMAGH GAVNLARGMN
TLFLDQPGTG EAIRKRNLPA VFDAERWGSP AFDYLLTRSD VIHSQIGIFG LSFGGYHAPR
IAANDPRYAL CAVMGANHVW GQRQRERVAN EGENPVPHYW DHVMWVFGID DQAAFLEYAD
QITLDGQVEK IRVPFLITHG ENDRQIPAYN AQMSYDQAVN SPKRTLRIFT RADFEVEHCG
ADNGTGMRDY IADWCAQTFA EMAGNKG