Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3424 |
Symbol | |
ID | 5077573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 24940 |
End bp | 25698 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481148 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001165810 |
Protein GI | 146275650 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.686314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCC TGCCCCGCAC GCCCTCGTTC CGGCTCGACG GACGGCGCGC ACTGGTGACA GGCGCGGGCC GGGGTATCGG GCTGGCGATG GCCACCGCCC TGGCCGAGGC CGGTGCGGCG GTCACGCTCG TGGCTCGCTC TGCGGGCGAG ATCGAGGCAG CGGCGGCGGC GATCGGCAAT GGCGCTGTGG CCGCAACGCT CGACGTTTCG GACCTCGATG CGGTTGCCGC TTTCTTCACG GCGCGCGAGC CGTTCCACGT GCTTGTCAAC AACGCCGGAA CCAACCGCCC CAAGCCGATG TGGGACGTGA CCGAGGCCGA CTATGACGCC GTTCTCGACC TCAACCTCAA GGCCGCGTTC TTCGTCGCGC AGGCCTGTGC GCGGCGGATG ATCGAGACCG GCACGCAAGG CTCGCTCATT CACATGGGCA GCCAGATGGG CCACGTCGGC GGGCCCAACC GGTCGCTCTA TTGCGCGAGC AAGTGGGCGC TCGAAGGCAT GAACAAGTCC TTCGCTCTCG ATCTGGCAAC CCACGGCATC CGCTCCAACA CCATCGCCCC GACCTTCATC GAAACCCCGC TGACGCAGCC GATGTTCGCG GACCCGGCGT TCAAGGCCAG CGTCCTGTCG AAGATCAAGC TTGGCCGCAT CGGCCGGGTC GAGGATCTTA TGGGCGCGGT GCTGTTCCTC GCTTCCGATG CCTCGGCATT GATGACCGGA ACCAGCCTTG TCGTCGACGG CGGCTGGACC GCAGAATAG
|
Protein sequence | MTALPRTPSF RLDGRRALVT GAGRGIGLAM ATALAEAGAA VTLVARSAGE IEAAAAAIGN GAVAATLDVS DLDAVAAFFT AREPFHVLVN NAGTNRPKPM WDVTEADYDA VLDLNLKAAF FVAQACARRM IETGTQGSLI HMGSQMGHVG GPNRSLYCAS KWALEGMNKS FALDLATHGI RSNTIAPTFI ETPLTQPMFA DPAFKASVLS KIKLGRIGRV EDLMGAVLFL ASDASALMTG TSLVVDGGWT AE
|
| |