Gene Saro_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3424 
Symbol 
ID5077573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp24940 
End bp25698 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID640481148 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001165810 
Protein GI146275650 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.686314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC TGCCCCGCAC GCCCTCGTTC CGGCTCGACG GACGGCGCGC ACTGGTGACA 
GGCGCGGGCC GGGGTATCGG GCTGGCGATG GCCACCGCCC TGGCCGAGGC CGGTGCGGCG
GTCACGCTCG TGGCTCGCTC TGCGGGCGAG ATCGAGGCAG CGGCGGCGGC GATCGGCAAT
GGCGCTGTGG CCGCAACGCT CGACGTTTCG GACCTCGATG CGGTTGCCGC TTTCTTCACG
GCGCGCGAGC CGTTCCACGT GCTTGTCAAC AACGCCGGAA CCAACCGCCC CAAGCCGATG
TGGGACGTGA CCGAGGCCGA CTATGACGCC GTTCTCGACC TCAACCTCAA GGCCGCGTTC
TTCGTCGCGC AGGCCTGTGC GCGGCGGATG ATCGAGACCG GCACGCAAGG CTCGCTCATT
CACATGGGCA GCCAGATGGG CCACGTCGGC GGGCCCAACC GGTCGCTCTA TTGCGCGAGC
AAGTGGGCGC TCGAAGGCAT GAACAAGTCC TTCGCTCTCG ATCTGGCAAC CCACGGCATC
CGCTCCAACA CCATCGCCCC GACCTTCATC GAAACCCCGC TGACGCAGCC GATGTTCGCG
GACCCGGCGT TCAAGGCCAG CGTCCTGTCG AAGATCAAGC TTGGCCGCAT CGGCCGGGTC
GAGGATCTTA TGGGCGCGGT GCTGTTCCTC GCTTCCGATG CCTCGGCATT GATGACCGGA
ACCAGCCTTG TCGTCGACGG CGGCTGGACC GCAGAATAG
 
Protein sequence
MTALPRTPSF RLDGRRALVT GAGRGIGLAM ATALAEAGAA VTLVARSAGE IEAAAAAIGN 
GAVAATLDVS DLDAVAAFFT AREPFHVLVN NAGTNRPKPM WDVTEADYDA VLDLNLKAAF
FVAQACARRM IETGTQGSLI HMGSQMGHVG GPNRSLYCAS KWALEGMNKS FALDLATHGI
RSNTIAPTFI ETPLTQPMFA DPAFKASVLS KIKLGRIGRV EDLMGAVLFL ASDASALMTG
TSLVVDGGWT AE