Gene Saro_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3422 
Symbol 
ID5077571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp22501 
End bp23445 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID640481146 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001165808 
Protein GI146275648 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.247714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGG CAACCTTGCG CGATGGAACG AAGGACGGAC GGCTTGTCGT CGTCTCGCCC 
GATGGCACGG CATGTGCCCC CGCGCCCGTC ACGACGTTGC AGCAGGCGCT CGAGGATTGG
GTTGAGGTCG AACCGGCCTT GCGCGCCATC GCGGCGTTTC CCGATGTCCT CGATCCAGCG
CAGGTCATGG CCCCGCTGCC GCGCGCCTGG CAGTGGCTCG ATGGCTCCGC GTTCCAGAGC
CATGGCGACC TGATGGACGC GGTGCTTGGC ATCACCAAGC CGAGGACCGA CGTGCCGCTG
ATGTACCAGG GCACATCCGA CAGGTTCTAT GGTCCGACCG ACGACGTAAA GTTCCCCGAC
GAGGCGCTGG GGATCGATTT CGAGGGCGAG TTCGGCGTGA TCGTCGATGC GGTGCCGATG
GGCACGAGCG CGGCGGACGC AATGGGCCAC ATCCGCCTTG TCGTCCAGAT CAACGACTGG
TCGTTGCGCA CCCTTGCCGG GCCGGAAATG AAGACCGGCT TCGGATGGGT CCAGGCCAAG
CCCCCGTGCG GCATGGCGCC CTTCGCCGTG ACGCCCGAGG AACTGGGCGA TAGCTGGCAC
AACGGGCGCG TGTGCCTCGA TCTCGAGGTC GACTGGAACG GCCGGCGCTT TGGCGCCGCC
AATGGCGAGC CGATGGGTCA TGGCTTCCAC GAACTCGTCG CCCACGCCGC CCGCACGCGC
GATCTCGTCG CTGGCACGGT GATCGGATCG GGCACCGTAT CCAACGCCAA TTTCCGCGAG
ATCGGATCGT CGTGCATCGC CGAACGGCGC GGGATCGAAG TCATCGATCT TGGCGAACCG
AAGACGGAAT TCATGCGGTT CGGCGATACC GTTCGCATGG AAGCGGTCGA CGCAAGCGGA
CGCGCCCCGT TCGGCGCCAT CGAGCAGAAG GTAGTGAAGG CATGA
 
Protein sequence
MRLATLRDGT KDGRLVVVSP DGTACAPAPV TTLQQALEDW VEVEPALRAI AAFPDVLDPA 
QVMAPLPRAW QWLDGSAFQS HGDLMDAVLG ITKPRTDVPL MYQGTSDRFY GPTDDVKFPD
EALGIDFEGE FGVIVDAVPM GTSAADAMGH IRLVVQINDW SLRTLAGPEM KTGFGWVQAK
PPCGMAPFAV TPEELGDSWH NGRVCLDLEV DWNGRRFGAA NGEPMGHGFH ELVAHAARTR
DLVAGTVIGS GTVSNANFRE IGSSCIAERR GIEVIDLGEP KTEFMRFGDT VRMEAVDASG
RAPFGAIEQK VVKA