| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3420 |
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| Symbol | |
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| ID | 5077569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 21234 |
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| End bp | 21992 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481144 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001165806 |
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| Protein GI | 146275646 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.264483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC TGTTCGACCT TTCCGGCAAG GCCGCGATCG TCACCGGCTC CACGCGCGGG
ATCGGCCGCG CGATTGCCGA GGCGCTTGTC GCGGCCGGCG CGCGGGTCGT GATTTCCAGC
GAGGATGCGG CCGATACCGC GCGCGTGGCG GCGGAGCTTG GCATGCCCGG CTGCGCCTGC
GACGTTGCCG ATGACCTTCA GCTTGCCGCC CTTGTCGAGT TTTCGCTTGC TTCGCTGGGG
CGGCTCGACG TGCTGGTTTG CAACGCGGGG ATCACCGGCA AGGCGGGCCC CTTCGCCGAG
ATCGACATGG ACGATTACGC ACGCGTCATG GCGATCAACC TGCGCAGCCA GGTCGTGATG
TGCAACCTTG CCCTGCCGCA CATCGCGGCG GGCGGGGGCG GCGCAGCCAT TCTGGTGGCG
AGCCTGTCAG CCCTGCGCGG CAATGGCCGG ATCAATGCCT ATGCCCTCGC CAAGGCAGGC
GTCGCCCAGC TTGCGCGCAA CCTTGCGGTG GAGTGGGGAC CACGGGCCGT CCGGGTCAAT
GCGGTTTCGC CGGGGTTCAT CGCGACCGAA TTGTCCGGCC CTCTGCTGGC TGACGAGGGC
TTCATGGCGC GCCGCATGTC GATGACCCCG CTGCGCCGCC CCGGAACGCC CGCGGAGGTC
GCGGGTGCGG CGGTGTTCCT TGCCTCGCCG GCCGGCGGCT TCGTTACCGG GCACAACCTG
GTGGTGGACG GAGGAACGCT CGTTACCGAT GGATCGTAG
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| Protein sequence | MNALFDLSGK AAIVTGSTRG IGRAIAEALV AAGARVVISS EDAADTARVA AELGMPGCAC
DVADDLQLAA LVEFSLASLG RLDVLVCNAG ITGKAGPFAE IDMDDYARVM AINLRSQVVM
CNLALPHIAA GGGGAAILVA SLSALRGNGR INAYALAKAG VAQLARNLAV EWGPRAVRVN
AVSPGFIATE LSGPLLADEG FMARRMSMTP LRRPGTPAEV AGAAVFLASP AGGFVTGHNL
VVDGGTLVTD GS
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