Gene Saro_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3417 
Symbol 
ID5077566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp18126 
End bp18983 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID640481141 
Productesterase/lipase-like protein 
Protein accessionYP_001165803 
Protein GI146275643 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0214076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGC GCGACGCCAT CGCCAGCATG GGCAACGCCC TGGGGCCGCA AGTGGTCGAA 
GCCTGCCGCG CGCTGTTCGA CGACGAACAG CGCGCGCTGG CGGCGCGGGT ACCGGTGCTG
GCCGCAGACT GCGTCTATGG TCCGCACGAG CGCCAGCGGC TCGACCTGTA TCGCACGGCG
AGTGCCGGTG CGCTTCCGGT GGTGCTGTTC GTTCACGGCG GCGGGTTCCG GCTGGGCGAC
AAGGGGCATG GCGGCGGCGA TAGCGGCTCG TGGCAGAACG CGGCCGTCGC CCGGACAATG
GCCGAGGCGG GTTTCCTCGG CGCCGCGATG AACTATCGCC TCCTGCCCGA TGCCCGCTGG
CCCGACGGCG GCGAGGACGT GATCGCCGCG GTCGAATGGC TTCGCGCCAA CGCGGCAGGC
TTTGGCGGCG ATCCGACGCG GATCTTCGTC GTCGGCACTT CGGCCGGGGC CGTGCACATC
GCGACCGCGA TCATGCTGCG CCCTGATCTT CCGGTGGTGG GCGCGGTGCT GCTTTCGGGG
CTCTATGGCC ACACCCCGCT CGACGACCGG GACGAGGGCT ACTACGGACC GCAGGCAGAC
TATGCCGCTC GAATGCCGCG CGAGGCGGTT GCATCGACAA CGATCCCCTT GTTCATCGCC
TGCGCCGAAC ACGATCCGCC GCGCTTCCAG GCAGAGTTCC TCGGCCTGAT GCGGGATCGG
CTGGAACGGC AGGGCGCGAT GCCGGCGGGC ACGATCCTTA GCGGCCACAA CCACTATTCG
ATGGCCATGC ACATCGGCAC CGGCGACCGC CGCCTTGCCG ACGAGATCAC GGGATTTATC
CTGCGGGCCT GCCGCTGA
 
Protein sequence
MDPRDAIASM GNALGPQVVE ACRALFDDEQ RALAARVPVL AADCVYGPHE RQRLDLYRTA 
SAGALPVVLF VHGGGFRLGD KGHGGGDSGS WQNAAVARTM AEAGFLGAAM NYRLLPDARW
PDGGEDVIAA VEWLRANAAG FGGDPTRIFV VGTSAGAVHI ATAIMLRPDL PVVGAVLLSG
LYGHTPLDDR DEGYYGPQAD YAARMPREAV ASTTIPLFIA CAEHDPPRFQ AEFLGLMRDR
LERQGAMPAG TILSGHNHYS MAMHIGTGDR RLADEITGFI LRACR