| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3412 |
|---|
| Symbol | |
|---|
| ID | 5077561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 13126 |
|---|
| End bp | 14343 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481136 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001165798 |
|---|
| Protein GI | 146275638 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGC TCATCCGCGA CGTGCGCATT TTCGACGGCC AGACAATGCA AGCCGGCAAC
CGTTCGGTCC TTGTCGAAGG CGGCCGCATC GCGGCCATTG GCGAAACCGC AGATGCGTTG
GACAACGCGG GCGCGGAAAC TGTTGTCGAA GGCAAGGGTC GCACGCTCAT GCCCGGCATG
GTCGAGGCCC ACGCGCATCT CACCTGGGCA TCCTCGGTCG AGAAGATCTA CCACCAGTTC
ATCCTGCCGC CCGAAGAACT CAAAGTCGCG GCCTGGCGCA ATGCACGCGT CCTGCTCGAC
CACGGCTTCA CCAGCGCCTA TTCAGCGGGC GCGCTGGGCG ATGGCATCGA GGTGGAGCTC
GCCAAGGCCA TCGAAGCGGG CGAGACGCCG GGACCGCGCC TGGTCCCCTC CACTCTGGAA
CGCAGCCCCG AAGGCGCCGA GGGCGTGGAG ACCGGCGACG TGTTCAACGG GCGTGGGCCC
GACGCGATCC GCAAGTTCGT CACCTATTGC AAGGACCAGG GCATCGGCTC GCTCAAGCTG
GTCGTGTCCG GCGAGGATGC GCTGAAGCCG GGATCGGCGG GCGACGTGCT CTACACCGAC
GAGGAAATGG AAGCGGCCGG CGTCGCGGCG CGCGAAGCGG GCCTGTGGAT CGCCACCCAC
GCCTATTACC CCAAGGCCAT CGAACTGGCG CTCAAGGCCG GCGCGCGCAT CATCTACCAC
GCCTCGTATG CCGACGAGGC GGCGGCCGAC GCGATGGTCG CGGCAAAGGA CGCGACGTTC
TATGCCCCCT CGCCCGGAGT CTCGGTTGCC GCGCTGGAAG CCACGCCCCC GCCGCACATC
GACATGAGCC ACATGAAGAA AAGCGCGGCG GAGCGAATGG AACTTGAAAG CAGGCTCGTG
CCCGCACTCA AGGCGCGCGG CGTGCGCATC CTGATCGGCG GAGACTATGG CTTTCCGTTC
AATCCCAACG GCCGCAACGC CCGCGACCTC GAAATCTTCG TCGAACACTT CGCGTATACG
CCCGCCGAGG CACTGACCGC CGCGACGAAG CTCGGCGGCG AACTGATGGG CATAGAGGTG
GGACAGGTCC GCGAAGGCTA CCTGGCGGAC CTCCTGCTGG TCGATGGCGA TCCGACCCAG
GACGTGGGGC TGCTCCAGGA CAAGAACCGG CTGGCCATGA TCATGAAGGG CGGCGCGATC
TACAAGGCGG CAGCATGA
|
|---|
| Protein sequence | MATLIRDVRI FDGQTMQAGN RSVLVEGGRI AAIGETADAL DNAGAETVVE GKGRTLMPGM
VEAHAHLTWA SSVEKIYHQF ILPPEELKVA AWRNARVLLD HGFTSAYSAG ALGDGIEVEL
AKAIEAGETP GPRLVPSTLE RSPEGAEGVE TGDVFNGRGP DAIRKFVTYC KDQGIGSLKL
VVSGEDALKP GSAGDVLYTD EEMEAAGVAA REAGLWIATH AYYPKAIELA LKAGARIIYH
ASYADEAAAD AMVAAKDATF YAPSPGVSVA ALEATPPPHI DMSHMKKSAA ERMELESRLV
PALKARGVRI LIGGDYGFPF NPNGRNARDL EIFVEHFAYT PAEALTAATK LGGELMGIEV
GQVREGYLAD LLLVDGDPTQ DVGLLQDKNR LAMIMKGGAI YKAAA
|
|---|
| |