| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3404 |
|---|
| Symbol | |
|---|
| ID | 5077553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 4890 |
|---|
| End bp | 6392 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640481128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001165790 |
|---|
| Protein GI | 146275630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.552289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCC TCCCCCATAA GTCGTTCGCT CTCCCCCTCG CCGCGCTTGC CCTCGCTGCA
TCGATGGGCG CGCGTGGCGG GGAAACCCCC GACCGCTGGT GGGCACCGGG CGAAGGCCGG
GTGCTCCCGG CGGTCCTCGA TTACGAGAAC GACCACGGCA CGCTGCGCAC GCTTGTCGTG
GGCGGTCCGC TGAAGACGAA AGGCCACCCG TTCTTCGAAC CGCTCGGCCC CAATGGCCGT
GCTTGCGTGA CCTGCCACCA GCCCGCCGAT GCGATGAGCC TGTCGGTCGA AAGCGTCCGG
CGCCAATGGG ATCGGACGAA GGGCAAGGAT CCGCTCTTCG CCGCAATCGA CGGTTCGAAC
TGCCCCACCC TTCCACAAGA AGCGCGTGAT TCGCATTCGC TGCTGCTCGA TCGCGGGCTC
TTCCGGATAG AGCGCCCGTG GCCGGTCACC AGCTTCAACG GCAGGCCGGT AACGCCCGAT
TTCACCATAG ATGTGGTGCG CGATCCCAAC GGCTGCAACT CCGGCCCGGC CTATGGCCCC
GCAGCCGGCA AGATCTCGGT CTATCGTCGC CCGCGCCCGG TCGCGAACAT GAAGTACCTG
CTCGCCGTCG GCTTCCCCTA CGATCCCAAG CAGGGATACG CGCTCCCGCT CGATCCCGAT
GACGGCAAGC CCCAGTCCGG AAACCTCATG GCCGACAACC GCGCGGGCAA CCTGCGCCTG
CAGATGGAAG ATGCGGCCAG CAGCCACCTC CAGATGCTGA AGCGCCTGGG CCCCGCCCAG
CGGAAGCGGC TTCAGGACTT CGAACTGCGC GTCTTCACCG CAATGCAGGT CAGCAAGACC
GGCGGCGCGG TCGACACGCT CGGCGCCAAG GCAGGCCCCG CCCGCCTGCG CGACAGCCAG
CCCGGCGCGC TCGGGTCCAT CGGCGAGCCA GTGTGGAGCG AATTTGCCGG CTGGGAGAAG
ATTTCGCCGG ACGACGCGGC AAAGCTCACG CCCCGGCATC TCGCGTTCCG CCAGTCGGTC
GCGCGCGGGG CAAGGGTGTT CCGCGACAAG ACCTTCCTCA TCACCGATAC TGCGGGCATC
AACTCGCGGA TCGGCTTCGG CAACCCGGTG CGCAACTCCT GCGTATTCTG CCACAACATG
AGCCAGATGG GGAACGATGT CGCCCCGGGC CAGGTGGACC TCGGCACGAC GACGCTGCCC
TTTGCCGATC CGTGGGACGA CCTTCCGCTG TTCCGCATCA CCTGCACGGG CCGCCCGCAT
CCGCACTATG GCCGCGTGAT CTACACCTAC GATCCGGGCT TCGCGCTGAC CTCGGGCAAG
TGCGCGGATG TCGGCAAGAT CACGCTCCAG TCCATGCGCG GCCTTTCCGC GCGAGCCCCC
TATTTCTCGA ACGGTCTGGC AAGGGACCTT CGCGGGATCG TCGACTACTA CGAGCGCCGC
TATTCCATCG GCTATACCGA GCAGGAGAAG CAGGACCTCG TCAACCTGAT GAGCGTGCTG
TGA
|
|---|
| Protein sequence | MAILPHKSFA LPLAALALAA SMGARGGETP DRWWAPGEGR VLPAVLDYEN DHGTLRTLVV
GGPLKTKGHP FFEPLGPNGR ACVTCHQPAD AMSLSVESVR RQWDRTKGKD PLFAAIDGSN
CPTLPQEARD SHSLLLDRGL FRIERPWPVT SFNGRPVTPD FTIDVVRDPN GCNSGPAYGP
AAGKISVYRR PRPVANMKYL LAVGFPYDPK QGYALPLDPD DGKPQSGNLM ADNRAGNLRL
QMEDAASSHL QMLKRLGPAQ RKRLQDFELR VFTAMQVSKT GGAVDTLGAK AGPARLRDSQ
PGALGSIGEP VWSEFAGWEK ISPDDAAKLT PRHLAFRQSV ARGARVFRDK TFLITDTAGI
NSRIGFGNPV RNSCVFCHNM SQMGNDVAPG QVDLGTTTLP FADPWDDLPL FRITCTGRPH
PHYGRVIYTY DPGFALTSGK CADVGKITLQ SMRGLSARAP YFSNGLARDL RGIVDYYERR
YSIGYTEQEK QDLVNLMSVL
|
|---|
| |