| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3403 |
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| Symbol | |
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| ID | 5077552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 2678 |
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| End bp | 4873 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481127 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165789 |
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| Protein GI | 146275629 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.181941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATC TTACACTGCG CAGTCGCGCT GTGCTCGCCG TACTCATGTC CACCGTTGCC
ACGCCAGCGC TTGCGCAAGC GGTCGACGAG CCCGCGAACG ACGGCGGCCT CGAAGCCATC
GTCGTCACCG CAGAGCGCCG CGAGCAGAGC CTCCAGGCCG TGCCGATCTC GGCCACCGTG
CTTTCGGGCG AAGAGCTTCA GCGCAAGGGC GTTTCCAACC TCAACGACAT CCAGCAGGTC
GCACCCTCGG TTGCCATCAA CACCTTCAAC CGCTCGACCT TCATCAACAT CCGCGGCGTC
GGCATCGCCC AGTCCGCGCC CACCTCGAAC CCCGGCGTCG CCTACTACAT CGACGGCCAG
CTCATCCCGC ACGAGCAGTT CATCGGCCAT TCGTTCTTCG ACATCGGCAC GATCGAGGTC
CTGCGCGGCC CCCAGGGCAC GCTGACCGGC CAGAACTCCA CCGGCGGCGC GATCTACGTC
CGCACGCCCG AGCCCGAGTT CGACAGCACC TTCGCCATCG GTGACGTCAC CGTCGCCAAC
TACGACCGCT ACCGCGCCGT CGCCGCGCTG AACCTCGGCG GCGAGGACGT CGCCCTGCGC
ATCGCCGGCG TGCACGAGGA GCGCGACAGC TTCACGCGCA ACATCGCGGC CAACGCGCAG
AGCCAGCCCG GCAACCTCAA CATGGACGCG ATCCGCGCCA ACCTGCGCCT GCGCGACATG
GACGGCCGCC TGACCGTCAA CGTGCGCGGC GAATACTTCG ACGTCCGCTC CGACAACAAC
GCGGTCAAGA ACCGCAACGA CAAGGTCAGC AGCAATCCGT TCGAGATCGA GGAAGACGCG
CTCTCGTTCC AGAACCAGGC CGGCTACCGC ATCTCGACCG AGGCACGCTA CGACGTGTCC
GACAGCGTCC AGGCGCGGGG CCTCGTGTCC TGGCAGGACG GCTATACCCA CGACCAGACC
GACGGCGACC GCACCGCGAC CGCCCAGGCC GTCCCCGCCA ACCTGTCCAC CAGCAGTGCC
AACACCCGGA CCTATCCCGG CCGCGTCAGC AATGGCGACA CGCGCTTCAA GACCCTGATC
GGCGAGTTCA ACCTGCTCTC CACCGACAAG GGGCCGCTGC AGTGGGTCGT CGGCGGCTTC
GTGATGGACG AAACCGTCCC CGTCACCTTG CTGCGCGACA ACCGCAACAC GCTCGACCTG
CTCCAGTCGA ACAGCTCGAT CATCACCGAG GCGAAGAACA CCTCGCAGTC GGTCTTCGGC
CAGGTGAACT ACTACGTCAC ACCCGCGATC GAAGTTCTGG CGGGTGCGCG CTACAGCTTC
GACAAGCAGG TCTATACCCG CTTAGCCGTC CCGGGCGCAG GCTTCACCCT GCCTTTCACC
AGCGAAGCGA AGTCGGAACA GCTCACTGGC AAGATCGGCC TCAACTACCA CTTCGGCGCC
GACAACCTGC TCTACGTGAC CGCATCGAAG GGCTACAAGG CGGGCGGCGT GAACCTCACG
CCCAACACTC CCGACTTCAA GCCGGAACGC AACTTCGTCT ACGAAGCAGG CTTCAAGACC
GAACTCCTCG ACCGCCACCT GCGCGTGAAC GGCGACGTGT TCTACTCGGA TTACAAGGAC
ATCCAGCTTT CCAGCCTCGT CGGCGGCCTG CCCACCACGC AGAACGCGCT GGCTGGCCGT
GCCTATGGCG GCGAACTTGA AGTCACTGCC CAGTTCGGCG GCTTCGCGGC GAACGCCGGC
CTCGGCTACC TCGATGCCAA GTTCAAGAAC TCGGCCTGCA TTTCCGACAC CAACGCCGCC
GGCACCGATC CTGGCTGCGC CACCAACCTG CGCTTCGTGC CCAAGGGCCG CGTCCTGCCG
TTCTCGCCGG AATGGACCGT CAACGCGGGC GTCCAGTACA CGCTCTCGCT CGGCAGCGTG
GACGTGACTC CGCGCGTGCA GTGGTCGTAC CTGTCGGAAC AGTACGCCAC CCCGTTCCCC
AGCGTGAACA CGCTGGTCCC GGGCCGCAAC CTGTTCGACG CGCGCCTCAC TTTCGACCTC
GGTCGCAAGT ACAAGCTCGA AGGCTTCGTC AACAACCTGA CCAACAAGAC CTACATCGCC
ACGCAGATCC AGAACAGCTC GAGCGCGGAC GGCGGCATCA TCTACGGTGC ACCCCGCACC
TGGGGCGTTC GCCTGAAAGT CGAGATCGGC AACTGA
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| Protein sequence | MPDLTLRSRA VLAVLMSTVA TPALAQAVDE PANDGGLEAI VVTAERREQS LQAVPISATV
LSGEELQRKG VSNLNDIQQV APSVAINTFN RSTFINIRGV GIAQSAPTSN PGVAYYIDGQ
LIPHEQFIGH SFFDIGTIEV LRGPQGTLTG QNSTGGAIYV RTPEPEFDST FAIGDVTVAN
YDRYRAVAAL NLGGEDVALR IAGVHEERDS FTRNIAANAQ SQPGNLNMDA IRANLRLRDM
DGRLTVNVRG EYFDVRSDNN AVKNRNDKVS SNPFEIEEDA LSFQNQAGYR ISTEARYDVS
DSVQARGLVS WQDGYTHDQT DGDRTATAQA VPANLSTSSA NTRTYPGRVS NGDTRFKTLI
GEFNLLSTDK GPLQWVVGGF VMDETVPVTL LRDNRNTLDL LQSNSSIITE AKNTSQSVFG
QVNYYVTPAI EVLAGARYSF DKQVYTRLAV PGAGFTLPFT SEAKSEQLTG KIGLNYHFGA
DNLLYVTASK GYKAGGVNLT PNTPDFKPER NFVYEAGFKT ELLDRHLRVN GDVFYSDYKD
IQLSSLVGGL PTTQNALAGR AYGGELEVTA QFGGFAANAG LGYLDAKFKN SACISDTNAA
GTDPGCATNL RFVPKGRVLP FSPEWTVNAG VQYTLSLGSV DVTPRVQWSY LSEQYATPFP
SVNTLVPGRN LFDARLTFDL GRKYKLEGFV NNLTNKTYIA TQIQNSSSAD GGIIYGAPRT
WGVRLKVEIG N
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