Gene Saro_3998 details

Gene Information

• Locus tag: Saro_3998
• ID: 5077528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_009426
• Strand: -
• Start bp: 165669
• End bp: 167783
• Gene Length: 2115 bp
• Protein Length: 704 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640481103
• Product: mating pair stabilisation TraN
• Protein accession: YP_001165765
• Protein GI: 146275604

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGCGC CGCGCCTTGC TGGATTTGCG CTTGCCGGGA TGGTGCTGCT CGCCGCGGCC 
GGCGCACAAG GACAGGTCTA CATCCCCCCG CCCGACGATC TGGTCGAGCC GCAACCGCCG 
CTCCCGCCCG CGATTGATCC CGGCGTGCCC GCTCCCGCCC CGCCGCCTCC TTCCGCGCCT 
GCCACCATGA CCGTGGACGA GGCCAAGGCC GAGGCTCGGG CGACCGGATC GAGCGTGCGC 
GGCGCCTACC AGGGGATCAC CGATGCCCCG GGTGCGGCCG GGCAGATACC GGGGTATCAG 
GCGGAATATC CCGGACTCAC CCAGTATTAC GACAATCCCG GCAACATGTA CGCCGATGGG 
GCGGCGGCCG GCGTGAATAG CAATGCCTAC CGCACCGCCA ATTCGACCAC GCGGCCGACC 
GTCGATGTCA CCCGCGCCGA CCTGTCCCGC GCCAACACCG TGACCGACGA TCCCAATGCC 
TACTTGTCTG GCATGAGCGC GGACGGGTCG ACCGGCAATT GCGTCCCGCT GCCGCCGAGT 
CCGGGGACCA CCAACACTGC CGAATGGACC TGCAATGTCG GCTCGAGCGT GGTCGAACAG 
CCCAAGACCT GCACCCGCAG TCTCACCGTC GCGCCATGGA ACGAGACGCT CTACCAGTAC 
CTCTGCGTCA CGGCCCCTGG CTTTCCGGGC TGCGCCTCGC TTGAGGGCAA CGCCCTGTGC 
CGCAAGACCG GGACCTTCCC TGTTCCCGAC TATAACCTCA CGGTCGACTA CTACGACTGC 
GACGCAGGCG TCAGTGATCC CAACGTCTAC CTCATGGGCA CGGTGGCCAA ACCGCCGCCG 
GCGGACGCCT TCCAGGTCGT GAGCAACGTC TATCGCTGCA ACAACGAAGG GATCACCGAT 
GCGCTGACCT TTGATCCCGT GACGGGTTTT CCCGTCCAAT ATGTGAGCGG GCTTCAGCAG 
TGCGGGGCGA TATCGGCGGA GCCGAGCTGT ACCCAAACCA CCGCCTCCGC GGCAGGCCTC 
ACCGACCGCC AGCTCTGCAA GACCTGGGAT TTCATCGGCG ATCCGTTCGG GGGAGGGGGC 
TACCTCACTT GCCTTGAGCC CGCTTCGCTA GAAGCGGTCT ATTCGTGCAG CACCAATGTC 
GCCGGCATCG TGCCCGAAAG CTCGGTATCG AAGTGGTTCA CCCAAGTCTG GACCGACAAT 
GCCTGCTCGG TCGATCTTGG CACCTGCACC CTCGCTGCCG AGACCTGCAC TGCCCCCAAT 
GAAACCCGCC TGATCGATGG CGTGCCGGTC ACGCGGGCCT GCTGGGAGAC GGCGAAGACC 
TACCAGTGCC AGACCGTGGT GGGCGGCGGC AACGACTGCG GCAAGCTCGA TGCAACCCCC 
GGCTGCATGT TCGACCACGA GACCTGTCTC GACGATCCGC CCAGCGGAGA TGGTTCGTGC 
AAGGTCGCCG AGCGTGTCTA CAAGTGCCCG ATCCCGGGAT CGACGAGCCA GCCTGCGCAG 
TACATCTGCG GGGACGACGT CTACTGCGTC AATGGCGACT GCGAGCCGAT CGTTCGCGAG 
GCCTCCGACG AGTTCAAGGA CGCGGTCGTG GCGCTGAACG CGCTCGGACA GGCCAATTCC 
GAGTTCGACG AAAGCACGCT GACGCTGTTC AAGGGCACCG CCGAGAGTTG TGCGCACAAG 
GTCTTCGGTC TCGCCAACTG CTGCTCGGGG AAGGGCGTCC CGCTCCTCGT TCCGCTGCTG 
TGCAGCCCGG CCGAGGTGCT GCTCGATCAG AAGGACGATG CAGGGCTCTG CCACAAGATT 
GGCACTTACT GCTCGTCGAG CTTCCTTGGC ATCTGTCTTT CCAAGCGCGA TGTCTATTGC 
TGCTTCCTCT CGAAGATCAG TCGGATCCTC CAGGAGCAGG GCCGGCCCCA GATCGGCAAG 
ACATGGGGAA CGCCGAAGAA GCCCGTCTGC GACGGCTTCA CCATTTTCGA GTTCCAGCAG 
CTCGACCTCT CGGTGATGGA TTTTTCCGAA ATCTACGCGG AGTTCGTCGA TGCGGCGAAG 
CTCCCCGACG AAGCCGCCAC GCTCATCGAA ATCCAGGCAA AGATCGAGGC CTATTATGCC 
GCGCACAAGC CCTGA 

 

Protein sequence

MRAPRLAGFA LAGMVLLAAA GAQGQVYIPP PDDLVEPQPP LPPAIDPGVP APAPPPPSAP 
ATMTVDEAKA EARATGSSVR GAYQGITDAP GAAGQIPGYQ AEYPGLTQYY DNPGNMYADG 
AAAGVNSNAY RTANSTTRPT VDVTRADLSR ANTVTDDPNA YLSGMSADGS TGNCVPLPPS 
PGTTNTAEWT CNVGSSVVEQ PKTCTRSLTV APWNETLYQY LCVTAPGFPG CASLEGNALC 
RKTGTFPVPD YNLTVDYYDC DAGVSDPNVY LMGTVAKPPP ADAFQVVSNV YRCNNEGITD 
ALTFDPVTGF PVQYVSGLQQ CGAISAEPSC TQTTASAAGL TDRQLCKTWD FIGDPFGGGG 
YLTCLEPASL EAVYSCSTNV AGIVPESSVS KWFTQVWTDN ACSVDLGTCT LAAETCTAPN 
ETRLIDGVPV TRACWETAKT YQCQTVVGGG NDCGKLDATP GCMFDHETCL DDPPSGDGSC 
KVAERVYKCP IPGSTSQPAQ YICGDDVYCV NGDCEPIVRE ASDEFKDAVV ALNALGQANS 
EFDESTLTLF KGTAESCAHK VFGLANCCSG KGVPLLVPLL CSPAEVLLDQ KDDAGLCHKI 
GTYCSSSFLG ICLSKRDVYC CFLSKISRIL QEQGRPQIGK TWGTPKKPVC DGFTIFEFQQ 
LDLSVMDFSE IYAEFVDAAK LPDEAATLIE IQAKIEAYYA AHKP