Gene Saro_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3996 
Symbol 
ID5077526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp164469 
End bp165281 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID640481101 
Producthypothetical protein 
Protein accessionYP_001165763 
Protein GI146275602 
COG category 
COG ID 
TIGRFAM ID[TIGR02740] TraF-like protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACC GCCAATGCAT TGCCCTGCTT GCCGCCTCCA GCGTCGCGCT TACCGGGACC 
GCACCGCTGC GCGCCTCCGA GGGCGACGGT GTCGAGGTGC GGCAGTCCGA GGACGCGCTC
TACTGCAAGG AGAGGAAGCT CGGCACCTGG TTCTACTGCG AGAAGCCCAA GGAGGAGCCG
CGCAAAGCTG CTGCTGCGCA GCCACCAGCG CGCGAGCGAC TGGCCGCAAT CGGGACCCAG
CTTGAAGAAC TGAAGGCGCG CGCGATCCTC GAGCCGAGCC CGGAGAACGT CACCGCCTAT
GTCCGCTTCC AGCGCGAACA GCTCGACCGC TCCTCGATGT TCGCCGACGT CTGGCAGCGC
GCGCTGTGGC AGGATCCCGG GCTCGACTAC ACGCTGCAGC GCCCGGTCTC GACGCTCGGC
AAGCGCGCCT GGATCGACGA GCGCAAGACC GACCGCGACC GGGTCATGGC CAATCTCTCG
CAGCGCTACG GGGTGTTCTA CTTCTTCGCC TCGAGCTGCG GCGCCTGCGA CATCTTCTCG
CCGATCCTCA AAGCCGTCTC GGACAAGTAC GGCCTCGCGG TGCTCGCGGT CTCCACCGAT
GGCGGACCTT CCTCGACCTT CCCCGGCTAC ATGGTCGACA GCGGGCAATA CGAGAAGCTC
GGGCTTGGCA CCGACCGCCA GGTGCCCGCG CTGGTGCTGT TCGATTCAGT CACCAAGCAG
CCGATGCCGA TCGGCTACGG AATCCTCAGC CAGGACGAGA TCATGGACCG CGTCTTCCAG
CTGACGCAGG TCAAGGTGGG GAGCGACTAC TGA
 
Protein sequence
MNHRQCIALL AASSVALTGT APLRASEGDG VEVRQSEDAL YCKERKLGTW FYCEKPKEEP 
RKAAAAQPPA RERLAAIGTQ LEELKARAIL EPSPENVTAY VRFQREQLDR SSMFADVWQR
ALWQDPGLDY TLQRPVSTLG KRAWIDERKT DRDRVMANLS QRYGVFYFFA SSCGACDIFS
PILKAVSDKY GLAVLAVSTD GGPSSTFPGY MVDSGQYEKL GLGTDRQVPA LVLFDSVTKQ
PMPIGYGILS QDEIMDRVFQ LTQVKVGSDY