Gene Saro_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3994 
Symbol 
ID5077524 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp159346 
End bp160292 
Gene Length947 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID640481099 
Producttransposase 
Protein accessionYP_001165761 
Protein GI146275600 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCACG GTCTTTCGAT GGATTTGCGG GTCCGGCTTC TGGCTGCGGT TGACGGTGGG 
CTGAGTTGCC GAGCGGCGGC AGCGCGGTTT GGCGTCGCCC CTTCGACGGC GATCCGGTGG
CATGCGCAGC GGCGTGCCAC CGGTGACTTT GCTCCCAGGC CTCAAGGTGG CGACATGCGC
TCGCGCCGGG TGGAGGAGCG ATCTGCCGAC ATTCTGGCAC TTTGGGAGGC GCGCAAGGAC
ATCTCGCTGG AGGAGTTGCG CATCGCCTTG GCTGAGGTTG GCCTGACCGT CTCGGTTGCC
GGGCTGCATC GCTTCTTCGT GCGCCGGGGC ATGACGCGCA AAAAAAGACT GGCCATGCTG
TCGAGCAGGA CCGTCCCGAC GTCCTGAAGC AGCGTCACCA CTGGTTCGAC GGCCAGATCG
ATCTGGAACC CGAGCGCCTG GTCTTTATCG ACGAGACGTG GACCGCCACC AACATGACCC
GCAGCCATGG CCGTTGCGCC AAGGGTGAGC GGCTGCGGAT GGGCTACCCA CATGGTCATC
GCAAGACCAC CACGCTGGTT GCAGGCCTGC GGATGACCGG CATGGTCGCG CCGATGGTGC
TGGACGGGCC GATCAACGGT GACTGGTTCG AAGCCTACGT GGCGCAGGTT CTCGTGCCCG
AACTGCGGCC CGGTGACGTC GTCATCATGG ACAACCTGTC GAGCCACAAG CGCCCCGCAG
TCCGCGACCG GATCGAGGCG GCAGGAGCAA CACTGCGCTT CCTCCCGCCC TACAGCCCCG
ACTTCAACCC GATCGAGAAG GCCTTCTCCC GGCTCAAGGC CATGCTCCGA AAAGCAGGCG
AACGAACCGT CAGCGGCCTG TGGGACCTCA TCGGCAAGCT CGTCGACATC TTCCGGCCCG
CCGAATGCGC CAACTACTTC AGTTCATGCG GATATGATCC AGACTGA
 
Protein sequence
MGHGLSMDLR VRLLAAVDGG LSCRAAAARF GVAPSTAIRW HAQRRATGDF APRPQGGDMR 
SRRVEERSAD ILALWEARKD ISLEELRIAL AEVGLTVSVA GLHRFFVRRG MTRKKRTGHA
VEQDRPDVLK QRHHWFDGQI DLEPERLVFI DETWTATNMT RSHGRCAKGE RLRMGYPHGH
RKTTTLVAGL RMTGMVAPMV LDGPINGDWF EAYVAQVLVP ELRPGDVVIM DNLSSHKRPA
VRDRIEAAGA TLRFLPPYSP DFNPIEKAFS RLKAMLRKAG ERTVSGLWDL IGKLVDIFRP
AECANYFSSC GYDPD