| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3970 |
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| Symbol | |
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| ID | 5077500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | - |
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| Start bp | 138836 |
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| End bp | 140002 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640481076 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001165738 |
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| Protein GI | 146275577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCG GTCGCCGGTC GTGGACGGTA TTGGATGATG ACGGCGATGT CGTCGAGTGC
CTTCGTCACT GGATCGTCCA TCTCGAACAG ACCCATGCGT CACCAAACAC GATCCGCGCT
TATGTTCGCC ACGTTGTGGA CTTCGCTAGC TTCCTCGGCG CAAACGGCGC CGGCATCCAT
GAAGCCACGG TTGCGCTGTA TGACAGCTTC CTTGCCTGGC GGCTTGCCCG CCGAAAGGAT
GCGCTGCCAA GTCCTCGGCT GATCCTGCTA CGCAAGCAGG AAACGCGGAT TCTGGCACCA
TCGACGCGCA ACCAGATCCA GCTCGCGGTC AAATCGTTCT ACCGCTTTTA CAACGGCACT
GACGACTTCG CGGTCGATAC GACCGAGGTC ACAAAGGCCT ATGACGGCCA CCGGATCTAC
AAGCCGTTCC TTGAGCATAT CAGCCAGCGA CGGACGACAC GGCGCAAAGA CCGTTATCTC
TCGGGCGATC CCGGCCGGGT CCAGCAGCAG GTGCTCAAGA AGCGGCTGAC GCCGAGCGAG
GTTCTGCGGC TGATCGAGGC CTGCGGGCTC GCGCGCGACG CCTTCCTGGT CGTGCTGCTC
TACAACACCG GCCTTAGGAT CGGTGAAGCG CTGGGCCTGC GCCATGTCGA TATCGATCTC
GCCGAAAAGG TCATCTGGGT CGTTCCGCGC GAAGACAATG CCAATGAGGC CCGTGCGAAA
TCGGGCCGGA CGCGCGGTGT GCCGGTGCAC GACTACGTGC TCAACATGTA CGTCGATTAC
ATCACCAGCG ACGAATATCT GCCAGCCTTC GAGTCCGGCG CCGAGTACGT CTTCACCAAT
GTCAAAGCCG GCGTCATCGG GCACGCCATG AGCCTGTCCT ACGCGCAGAA GCTCGCGGGC
CTGCTGGAGC AGCGCACCCA TATCGCCTTC AGCTGGCACA TGTTCCGCCA CAGCCATGCA
TCCGAGGCGA TCGCGGCGGG ATACAGCCTG CTCGAAGTGG CCGACCGGCT CGGGCATGCC
AGCCCGCAAA CGACAGCGGC GTTCTATCAG CACCTGTTCG CCTCGGAAAT CCGCAGGCTT
TACCTCACAG GACCCGACGA GGTGCATGAA AGGCTTGAGA AACTTCGCGA GGCTGAGCTG
CTCGGAAAGG ATCTGCGATG GGCCTGA
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| Protein sequence | MPGGRRSWTV LDDDGDVVEC LRHWIVHLEQ THASPNTIRA YVRHVVDFAS FLGANGAGIH
EATVALYDSF LAWRLARRKD ALPSPRLILL RKQETRILAP STRNQIQLAV KSFYRFYNGT
DDFAVDTTEV TKAYDGHRIY KPFLEHISQR RTTRRKDRYL SGDPGRVQQQ VLKKRLTPSE
VLRLIEACGL ARDAFLVVLL YNTGLRIGEA LGLRHVDIDL AEKVIWVVPR EDNANEARAK
SGRTRGVPVH DYVLNMYVDY ITSDEYLPAF ESGAEYVFTN VKAGVIGHAM SLSYAQKLAG
LLEQRTHIAF SWHMFRHSHA SEAIAAGYSL LEVADRLGHA SPQTTAAFYQ HLFASEIRRL
YLTGPDEVHE RLEKLREAEL LGKDLRWA
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