Gene Saro_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3947 
Symbol 
ID5077431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp121467 
End bp122990 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content59% 
IMG OID640481053 
ProductHSP90 family molecular chaperone-like protein 
Protein accessionYP_001165715 
Protein GI146275554 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.464724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT CCGAAGTAGC GAGCATCGGC ACGGCCCGGC CGGTGATCGG CAAGGACGTC 
TTGGAACTGC TCTCGACTGC AATGTACGTC GATCCGCTCA CCATTTACCG GGAGTACGTC
CAGAACGCAG CTGATGCGAT CGACGATGCT CGCGCGGCGG GACTCCTGCG CGCAGATGAG
GGCGCCATCG CCATCACCAT AGATCCAACG ACAAGAACAA TCACCATCCG CGACAACGGT
GTAGGCATCG CGTCTGACGC CTTTCAGTCC ATCCTGACCG CCATCGGAGC GAGCAGCAAG
CGCGGCACCG GCGCAAGAGG CTTTCGTGGA GTGGGCCGGC TTTCGGGCCT AGCCTATGCC
CGTGAACTGA CATTTCGGGC ATCTGCTGCA GGTGAGACGC AAGCTCACTC GTTGACCTGG
GACTGCCGTG CTCTTCGCTC AGTGCTGAGA GATTTCGATG ACCGCCGAGA ATTGCCCGAA
ATTGTCGGCG CTATCACGGT GATTGACGAA ACGTCCGGGG TTACCGCTGA TGAGCATTTT
TTTGAAGTTA TCTTGACTGG CGTTCCTCGG ATTGGGGATG ACCGCTTGCT GTCACCGGCT
GCGGTGAGTG ATTATTTAGC GCAAGTTGCG CCCGTACCGA TGTCCTCGCA GTTCACGTTG
GCGCCCGACA TCGATGCGCA GCTTGGCAGC CTCAACGACA TTCGACGCTT GGTCATTACC
GTCAATGGTG AAGCTCCCCT AACGCGACCG TTCGCGGACG AGATGCCAAT AGAGGGGGGG
CGGCCACTAT GCCTTCGGGA ATGCAGGTTC ATTGAAATAC CGAGCGTTGA CGGCGGTATC
GCTGCGCTAG CTTGGGTTGC CCATCACGAT TACGAAGGGG CCATTCACGC ATCTACAAAT
GTGCGCGGAC TGCGCGCTCG GGTCGGCGAC ATTCAGGTTG GAGATTCCAA CCTCTTCGAA
GACATCTTCC CCGAAACACG CTTCAACGCG TGGACCGTCG GCGAGGTTCA TATATTCGAT
CCGCGTATCG TCCCCAACGG TCGGCGCGAC GATTTCGAGC GCAACGTACA TCTGGCGAAC
CTGAAGAACC ACCTGGCCCC GCTCGGCCGG GAAGTCGCCG TACGATGCCG CACGAGCTCG
CGGGAACGCA AGCGTATCCG GGATTTCGAA CTTGCCCATC TGGCGGCATT GGAGAACATC
GCCATTCTCG AGCAGGGCAG CCTTGCGCCA AATGCCTGCG AACACGTTGC GCTCGCCGTC
GACATGACGG TCATGAAGAT GGAGAAGCTG GCCACCCCAG ACAACTTGCT GAATGGTGAA
GGGCGCGAAC GCGCCGCGAT TGAGGATGTG AAAACCCGGC TCGAAACAGT CACCCGTTCA
ACGGCATCGA GTTCGCCGCT CGAGCGGATG GCTCCCGAGC GCCGGGCGAA TTATGAGGAA
ATGTTCAGCC TTATCTACGA GTGCGCAGCC AACCGCTCCG CCGCCAAGGC GCTGATCGAC
CGGATCCTGG CAAAAATCGC GTAG
 
Protein sequence
MNLSEVASIG TARPVIGKDV LELLSTAMYV DPLTIYREYV QNAADAIDDA RAAGLLRADE 
GAIAITIDPT TRTITIRDNG VGIASDAFQS ILTAIGASSK RGTGARGFRG VGRLSGLAYA
RELTFRASAA GETQAHSLTW DCRALRSVLR DFDDRRELPE IVGAITVIDE TSGVTADEHF
FEVILTGVPR IGDDRLLSPA AVSDYLAQVA PVPMSSQFTL APDIDAQLGS LNDIRRLVIT
VNGEAPLTRP FADEMPIEGG RPLCLRECRF IEIPSVDGGI AALAWVAHHD YEGAIHASTN
VRGLRARVGD IQVGDSNLFE DIFPETRFNA WTVGEVHIFD PRIVPNGRRD DFERNVHLAN
LKNHLAPLGR EVAVRCRTSS RERKRIRDFE LAHLAALENI AILEQGSLAP NACEHVALAV
DMTVMKMEKL ATPDNLLNGE GRERAAIEDV KTRLETVTRS TASSSPLERM APERRANYEE
MFSLIYECAA NRSAAKALID RILAKIA