| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3937 |
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| Symbol | |
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| ID | 5077421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 111024 |
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| End bp | 112865 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640481043 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001165705 |
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| Protein GI | 146275544 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACCAG ATACTGTGAT GGCCCGGTTG GAGGCCATTC CGACGATCTC TGCGTCGGGC
AAACGGGTAA ATGGGCTTCA TCGTTTGATG AGGTCCCCGC TTCTTTGGGA GCAGGGACTT
CGGAAAATTG CCTCCAATCG GGGGGCGATG ACGCCGGGCA TCGATGGCAA GACATTCGAG
GATTTCGGTC CCGACCGTCT CGCTCCGTTG ATCGCCAGCG TTGCGACCGG AGCCTACAAA
CCAAAACCTG TGCGTCGGGT GTTCATCCCG AAAGGCAAAG GAAAGCGGCG TCCGCTGGGG
ATTCCCACGC GAGACGACCG CCTCGTCCAG GAAGTGGCAC GCCAACTGCT GGAACGAATC
TATGAGCCGG TCTTCTCGAA GGCCTCGCAT GGATTTCGAC CGGGAAGATC GTGTCATACG
GCCCTCGAGC ACGTGAAGGC TGTCTGGACG GGCGTCAAAT GGCTTGTCGA CGTGGATGTC
GCCGGGTTCT TCGAGAACAT CGACCATGAC ATTCTGCTGA AGCTGCTCCG GAAAAGGATC
GATGACGAAA GGTTCATCGA CCTGATCCGC GACATGCTGA AGGCAGGAGT CATGGAGGGA
AGGGCTCACA CCCAGACCTA TAGCGGCACA CCACAAGGCG GGATCGTCTC CCCGATCCTG
GCCAACATCT ACCTGCACGA ACTCGATGAG TTCATGGCGG GTCGGATCAC GGCCTTTGAA
AAAGGGAAGA CCCGCGCCAC GAACCCGGAA TACCGGAGAC TGGCGGGCCG GATCGCCAAA
CGGCGAGAAC GGCTCAAACG ACTGGAAGCC AGTGACAACG CTGATCAGGT AACGGTGAAG
GCCATCTTGG CCGAAATCAA CACCTTATCA AAGCAGATGC GTTCGTTGCC GTCGAGAGAC
GCCATGGACG CCGGGTTTCG CCGACTTCGC TACTGCCGTT ACGCCGACGA TTTTCTTATC
GGTGTGATTG GCAGCAAGGA CGATGCGAGA GGGGTCTTCG CCGAAGTCAG GACCTTCCTG
ACCGAGGTAC TGGCCTTGAC CGTATCCGAG GAGAAGAGCG GAATTCGAAA AGCAAGCGAT
GGTACCAAAT TCCTCGGATA CGAGGTGCGG ACTTACACGG GACGCCAATG GACAGTGCGA
AGCCAGAACG GCACACAGCA CTTCAAGCGG CGCCCGCCAT CGGAAGTCAT GCAACTCAAT
GTTCCGTGGG ATAGGGTCAC TGCGTTTGTT GCCCGGAAGG CATACGGAGA ATGGTCCCGA
TTGAGGGCCA AACACCGCAA CCACCTTCTA AGCTGTAGCG ATGTCGAGAT TGTCCTTGCC
TACAACGCCG AACTGCGAGG GTTCGCGAAC TACTACGCTC TGGCGCGCGA TGTGAAATTC
AAGCTCAACC GGCTTGAATA CCTTCAGCGC TGGAGCATGT TCAAAACCTT GGCAAGCAAG
CACAAATCCA GTGTGCGAGT TGTTGCCGCC CGCATGAGGC AAGGGCTGGA ATACCTCGCC
GGCTATGAAG TCGGCGGCCA GCCCCGATCA GTCAAAGTCT GGAAAATGAC CGATCTGAAC
CGTGACCGGA TAGACCCGGA CAAGGTGGAC GTCCAACCTT GGACGCAAAT CTTCTCCGGC
TCGCGAACAG ATTGGGTCGA CCGGCAGAAC GCCACGCAAT GCGAAGCGTG CGGCCGATCC
GACCTCCCCT GCCATGTTCA TCATGTCAGG GGAATGGCCG ATGTTGCGCA CAGAGACCAA
GCCACGAGGA AAGCCATAGC CAGAGCGCGC AAGACGAAGG TTCTGTGCGT CCCTTGCCAC
AAGGCGATCC ATGGTGGCCC ACTACCGGAG CAGAGAACAT GA
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| Protein sequence | MLPDTVMARL EAIPTISASG KRVNGLHRLM RSPLLWEQGL RKIASNRGAM TPGIDGKTFE
DFGPDRLAPL IASVATGAYK PKPVRRVFIP KGKGKRRPLG IPTRDDRLVQ EVARQLLERI
YEPVFSKASH GFRPGRSCHT ALEHVKAVWT GVKWLVDVDV AGFFENIDHD ILLKLLRKRI
DDERFIDLIR DMLKAGVMEG RAHTQTYSGT PQGGIVSPIL ANIYLHELDE FMAGRITAFE
KGKTRATNPE YRRLAGRIAK RRERLKRLEA SDNADQVTVK AILAEINTLS KQMRSLPSRD
AMDAGFRRLR YCRYADDFLI GVIGSKDDAR GVFAEVRTFL TEVLALTVSE EKSGIRKASD
GTKFLGYEVR TYTGRQWTVR SQNGTQHFKR RPPSEVMQLN VPWDRVTAFV ARKAYGEWSR
LRAKHRNHLL SCSDVEIVLA YNAELRGFAN YYALARDVKF KLNRLEYLQR WSMFKTLASK
HKSSVRVVAA RMRQGLEYLA GYEVGGQPRS VKVWKMTDLN RDRIDPDKVD VQPWTQIFSG
SRTDWVDRQN ATQCEACGRS DLPCHVHHVR GMADVAHRDQ ATRKAIARAR KTKVLCVPCH
KAIHGGPLPE QRT
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