| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3929 |
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| Symbol | |
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| ID | 5077413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 102783 |
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| End bp | 104174 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481035 |
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| Product | phage integrase domain/SAM domain-containing protein |
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| Protein accession | YP_001165697 |
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| Protein GI | 146275536 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.050158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACTT CAGAGACGCT GATCGTCATT CAGGAACGCC GGGCGGCGGA TGGCCTGGAC
TCCTACATCC CGGTAATCCT GCGAGGTGGA GAGATCTACG ATCCAGACCT CGACCGCTAC
TTCCTCGATC TGCCGTTGAA CGGGGCGCGT TCGCGCCATT CGCTGCGCGC CCACGGTTAT
GATGTCCTGG TCTGGGTTCG CTTCCTCGCC TCCGCGCGCG GCAAGTCTGT CTGGCAAGCC
GATACCGATG ATGTCGGTGC GTATCATCGG GCACGTCGGC GTAGTGACGC TGAGTTCCGG
GTTTCGGCGT CGACATGGAA CCGGGCGATT GCCTCGCTCG ACAAGCTTTA TCGATGGGCC
GAGCGGGAAG GCCTGATCGA GCGCACACCA TTTACCCACC GTCAGGTCTG GCGAAGTTCG
CACGGAGGGC GTCGAGCGGC CGTCACGGGC CGCAACGACG CCTATGAACG CGCGGCCCGT
CGGTCCGATG TTCGCTTCAT CGATCTCACC GATTACCGCG CCTTCCGCGA GGTCGGCCTG
CGCGGCCTGA CCGTAGAGGG AACCGAGCGT CCTGGAGCAC GTGACCGCAA TGGCGCGCGC
AATGCGCTGT TCGCCGATCT GCTGGTCACC ACCGGCCTGC GCCTCGAAGA GGCATCCTTT
CTGCTCGCCG CCGAGATTCC GGTTGGCGGC GCCCGCGCGG AACGGCAGCG GCGGGTCGAA
CTTCCGGCGG CACTCACCAA GGGGGACAGG GGGCGTGGCA TATTGCTGCC GCGCCGTTTG
TTGCCGATGT TTGACGCCTA TATTGCCGTG GAGCGAGCCG CAGCCGTCGC CAAGTTCGCA
AGGCGCCGTG GCTGGGAAGC CATCGACCGC CCGATCTTCA TACACCGCCC CTCATTCGGG
CTGCGCGCAT TGCAGCTGGT TGGCGGTGGC ACGATGGATA TGGAGGTCGT CACACCGGAT
GAACGCGCAA GGCTTGTTAT TTGCGCTGAC GATGGCACGC CCTGCGAAGC AGCGGTGCTC
TGGCTGACCG AGGTCGGGCA TCCGGTGCTT CCCAACTCGT GGGAAGCGAT CTTCGCGCGG
GCGAGCCGCC GCTCCATGGA TGCCGGCATC CCCGTCCGGG TCAGCCCCCA TCAGCTCAGG
CATTCGTTCG CGGTCCACAT GCTGGCCATG CTGATCCAGC GCCGCCTTGC CGAGGCGGCG
GCACCGGTGG GCGCTATGGA AGGTTATCGC CAGTTGGTCG GCGATCCGCT TCAGCAAGTC
CAGCGACTGC TCGGCCATTC AAGCCTCGCC ACGACCTCGA TCTATCTCGA TCACCTCGCC
ACGCGTGCCG ATACCATCGA TGCGGCGGTC GAAGAACTGT TGGCACTCGT ACCGGGCTAT
CTTCCATCAT GA
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| Protein sequence | MDTSETLIVI QERRAADGLD SYIPVILRGG EIYDPDLDRY FLDLPLNGAR SRHSLRAHGY
DVLVWVRFLA SARGKSVWQA DTDDVGAYHR ARRRSDAEFR VSASTWNRAI ASLDKLYRWA
EREGLIERTP FTHRQVWRSS HGGRRAAVTG RNDAYERAAR RSDVRFIDLT DYRAFREVGL
RGLTVEGTER PGARDRNGAR NALFADLLVT TGLRLEEASF LLAAEIPVGG ARAERQRRVE
LPAALTKGDR GRGILLPRRL LPMFDAYIAV ERAAAVAKFA RRRGWEAIDR PIFIHRPSFG
LRALQLVGGG TMDMEVVTPD ERARLVICAD DGTPCEAAVL WLTEVGHPVL PNSWEAIFAR
ASRRSMDAGI PVRVSPHQLR HSFAVHMLAM LIQRRLAEAA APVGAMEGYR QLVGDPLQQV
QRLLGHSSLA TTSIYLDHLA TRADTIDAAV EELLALVPGY LPS
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