Gene Saro_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3917 
Symbol 
ID5077401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp83388 
End bp84371 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content59% 
IMG OID640481024 
ProductparB-like partition protein 
Protein accessionYP_001165686 
Protein GI146275525 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG GAAATCGGGG CTTCGGAAGC AGCCTGACGG AAGGGCTGGA TGACGATATC 
GAGGTTGGCG CGCCGGCTCC CTCCGAAAGC ATTATGGCAA GCCGCAGTCA GAGTTTGGCA
AGGATCGCGG CAGGCAAAGT CGTGACCGAC CGGACGGAGT GGGTTGATCC CGCGCGCTGC
CGACCTTGGC GCCTTCATAA CCGCGACCTC GACCATCTTT CCGAAGATAG CTGCCGCGAT
CTAATCGACG CATTTCTCTC CGCTAAGAAG CAGCGAATCC CGGCAATCGT CCGTCGCCTC
AAGGACGACC CTGATCACGA CTTCGAGATC ATTGCGGGCG TTCGTCGTTG GTGGACGGTT
CAGTGGCTGC GTACCCACCA CCATCCCGAA TTCGAATATC TCGTAACGAT CCAGAACGTC
TCCGACGAAG AGGCATTTCG GGTTTCCGAC ATTGAGAATA GGTCTCGGAA GGATATCTCC
GACTGGGAGC GCGCGAAGGA ATATTCCCGC GCGCTCGACG AGTTTTACAA CTCAAACCAA
AGTGAGATGG CCGAGCATCT GAAGATATCG AAGTCGTGGC TCAGCCGCCT GCTGGACGTG
GCGCGGCTAC CATCAGAGAT CGTTGCTGCT TTCCCGGACA CCCATGGCAT TACCGTGCGG
GTGGCGCGAG ACATCAAGCC ACTGACTTCT GACAGGCGCG CACTGGATCT CATGATCGCC
GAAAGCCGTG CGATCGTGGC TGAGCGCGAT GATCTTGGAA CTGCGCTTCC CGCTCCAGAG
ATTGCGAAGC GCCTCATCCG CGCAACGGTC GCTCCAGTGA AGTCATCGAA CTCCGATGCC
GAAGTGAGGG GGGCGAATGG CAAGGTGATC TTGCGCTATG CGCATTCGGC GAGGGGAGGG
CACACGTTCA AGGTTCCTGC TCGAAGCGGT GCATCAACGG CTGAGGTTCT GAAGGCGATC
GAGTCCGTCT TGCAGAAAAG CTGA
 
Protein sequence
MAKGNRGFGS SLTEGLDDDI EVGAPAPSES IMASRSQSLA RIAAGKVVTD RTEWVDPARC 
RPWRLHNRDL DHLSEDSCRD LIDAFLSAKK QRIPAIVRRL KDDPDHDFEI IAGVRRWWTV
QWLRTHHHPE FEYLVTIQNV SDEEAFRVSD IENRSRKDIS DWERAKEYSR ALDEFYNSNQ
SEMAEHLKIS KSWLSRLLDV ARLPSEIVAA FPDTHGITVR VARDIKPLTS DRRALDLMIA
ESRAIVAERD DLGTALPAPE IAKRLIRATV APVKSSNSDA EVRGANGKVI LRYAHSARGG
HTFKVPARSG ASTAEVLKAI ESVLQKS