| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3912 |
|---|
| Symbol | |
|---|
| ID | 5077396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009426 |
|---|
| Strand | + |
|---|
| Start bp | 80185 |
|---|
| End bp | 80592 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640481019 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001165681 |
|---|
| Protein GI | 146275520 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCAAA TGCGTGATCC AGACCACCTT ACCTGCATGA TGCATGGTTC GCACGAGAAC
AGGCCTGATC GCGAAGAGGA AGTTCGCATC GCGCAACGCG CGATTGACGG CTGCCACACG
TCCTTCGAAA GACTGGCGCG GCAGTGGCAC CCCAAACTGG TTGCGCACGC CTGCCGTCTG
CTTGGCCACC GTGAACAAGC CAGGGACGCA GCACAATCCG CGTGGGTCAA GATCGCAAAA
GGTATCCGAA CCCTGCGCGA TGCGCGTGCG TTCCCGGCGT GGTCGTATCG GATCGTGACG
CGACGCTGCG CCAGTCTCAT CGCGAGCAAT CAAACGGACC GCGCTCTTGC CTCCAATCTG
CGGGATGATG CGGTCACGTG CGCAGGCACC GAGCAAGAAC CTCCGTAA
|
|---|
| Protein sequence | MNQMRDPDHL TCMMHGSHEN RPDREEEVRI AQRAIDGCHT SFERLARQWH PKLVAHACRL
LGHREQARDA AQSAWVKIAK GIRTLRDARA FPAWSYRIVT RRCASLIASN QTDRALASNL
RDDAVTCAGT EQEPP
|
|---|
| |