Gene Saro_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3908 
Symbol 
ID5077392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp78556 
End bp79002 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID640481015 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001165677 
Protein GI146275516 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA CGTCCGACGA GCAAAGCTAC CTTACCGAAG CCGATGGGCT CGTGTTCCTG 
ATCGAGGAGG TGCCGCGCAA GCTCCGCCGC GTGTTCGATG CATCGACCGC GAAGTTCGGG
CTAACCCGCA CCCAATGGCG CGCACTCGCC TATATCTTCA GGACACCCGG TCTGACCCAG
ACCGAACTCG CCAAATGCCT GGAGCTGGAG CGTGCAAGCG TTGGCCATGT CATAGACCAG
CTCGAAAAGG CGGACTATGT CGAGCGCCGC GCTGTCGAAG GCAATCGCCG GGTGTGGACC
TTGCATCTGC GCCCAAAAGC CATCGGCATC CTGCCCGCGC TTAGGGCGGA AGCCGATGTG
GTCTACGAAC GGTTGCTCGC TGGCATATCG GCTAATGACA TTGCCACCTT CAAGCGACTC
CTGGCCAGTA TGTCCGCCAA TCTGTAG
 
Protein sequence
MAKTSDEQSY LTEADGLVFL IEEVPRKLRR VFDASTAKFG LTRTQWRALA YIFRTPGLTQ 
TELAKCLELE RASVGHVIDQ LEKADYVERR AVEGNRRVWT LHLRPKAIGI LPALRAEADV
VYERLLAGIS ANDIATFKRL LASMSANL