Gene Saro_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3906 
Symbol 
ID5077390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp77187 
End bp77600 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID640481013 
Productthioesterase superfamily protein 
Protein accessionYP_001165675 
Protein GI146275514 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC CTGCAGCGAA GGTCGACCTC GAACAGCTCC GTGCGATGCT GCTCATCGCG 
CCGTTCCACC AATGGCTGGG GCTGGATATC GCCGAACTGA CAGACGAGGC GCTGATCCTC
GAGATGCCGT GGCGCGAGGA AATCGTCTCC AACCCGATGA TCGGATCGGC CCATGGCGGT
GTCCTCTCGG CGCTGATCGA CCTGACCGGG CTTTGCACCA TCAACGCGCT CGGCGGATCG
GCGCGCGCGA CGGCTGACAT GCTGGTCGAT TTCCACCGAC CCGCCACTTC GGGGCCGCTG
CGCGCGATCG GGCGGGTGGT CAAGCTGGGC AAGCAATTGA GCGTTGCCGA AACCCGGATC
GAAGATGCCG GGGGCAGGCT GCTGGCCAGC GGACGGGGTG CCTATGTCGG CTAA
 
Protein sequence
MSEPAAKVDL EQLRAMLLIA PFHQWLGLDI AELTDEALIL EMPWREEIVS NPMIGSAHGG 
VLSALIDLTG LCTINALGGS ARATADMLVD FHRPATSGPL RAIGRVVKLG KQLSVAETRI
EDAGGRLLAS GRGAYVG