Gene Saro_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3904 
Symbol 
ID5077388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp74604 
End bp75749 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID640481011 
Productefflux pump membrane protein 
Protein accessionYP_001165673 
Protein GI146275512 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR00998] efflux pump membrane protein (multidrug resistance protein A) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA CTGCGACACA AGCTGCCGAA GTCGATCCGG AACTGTCCGC CTTTCGCAAG 
GCACGCCGGA CGATGTGGCT CAAGCGCCTG GCCATCGTGC TCGCAGTGGT GGCTCTCGCA
TGGGGTGCCT GGTACGTGCT GGTCGCCCGC AACTATGTCA GCACCGACAA CGCCTACGTA
AATGCGCGAA TGGCGCAGGT CACGCCGCTG ATTGCTGGAT CGGCCATCGA GGTGCTGGTC
GAAGATACGC AGCAGGTGAA GGCGGGTGAT GTCCTGGTCC GGCTCGACCA GGCCAACGCC
AAAATCGCCG TCGCGCAGGC CGAAGCCGAT CTTGCCGCCG CCCGCCGCAA ATTCGGGCAG
GCTGTCGCGA CCAACAGCGC GCTGTCGGCC CAGATCGACA CCTCAAGCGC CGGTCTCGTA
CAGGCCCGGG CGCGACTTCG CACTGCAGAG TCCGAGTTCG ACAAGGCGCG GATCGACTTG
CGGCGCCGTG AGGCCGTCAT TGCCAGCGGC GCGATCTCGG GTGAGGAACT GACCCAGGCG
CGCAAGGCCT ACGCCTCCGC CAACGCGGCG CTCGAGGCGG CCCGCGGGGG CATCTCCGAA
GTCACTTCGG CCCGACGGGT CGCGCAAGGG CAACTTGCCG CCAACGACGC CCTGGTGCGC
GGCTCCAGCG TAGATACCGA CCCAGCGGTT CAGGCGGCCA AGGCCCGGCT CGATGCCGCC
TTGCTCGACC TCCAGCGTAC CGAAATTCGC GCGCCGGTTT CCGGGGTGGT GAGCCGCCTG
CAGATTCAGG TGGGACAGCG CCTGAGCCCC GGTCAGACTA TCATGACCAT CGTCCCGATC
GACAAGCTCT ACGTCGATGC CAACTTCAAG GAAGGCCAAC TCGGCCGTGT CCGTCCTGGC
ATGGCTGTAA CCCTCAAGTC GGATCTTTAT GGCGGCGATG TCGTCTACCA CGGCAAGGTC
ACCGGGCTGG CCGGCGGTAC GGGATCGTCG ATGGCAATCA TCCCCGCCCA GAACGCCACC
GGCAACTGGA TCAAGACTGT CCAGCGCCTG CCGGTGCGGA TCGAGCTTGA TCCTGCCGAA
CTGCGCAAGC ACCCGTTGCG CGTCGGGCTG TCGATGGAAG TCGAGATCGA TGTTTCCGGT
GAGTGA
 
Protein sequence
MSDTATQAAE VDPELSAFRK ARRTMWLKRL AIVLAVVALA WGAWYVLVAR NYVSTDNAYV 
NARMAQVTPL IAGSAIEVLV EDTQQVKAGD VLVRLDQANA KIAVAQAEAD LAAARRKFGQ
AVATNSALSA QIDTSSAGLV QARARLRTAE SEFDKARIDL RRREAVIASG AISGEELTQA
RKAYASANAA LEAARGGISE VTSARRVAQG QLAANDALVR GSSVDTDPAV QAAKARLDAA
LLDLQRTEIR APVSGVVSRL QIQVGQRLSP GQTIMTIVPI DKLYVDANFK EGQLGRVRPG
MAVTLKSDLY GGDVVYHGKV TGLAGGTGSS MAIIPAQNAT GNWIKTVQRL PVRIELDPAE
LRKHPLRVGL SMEVEIDVSG E