Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3904 |
Symbol | |
ID | 5077388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009426 |
Strand | - |
Start bp | 74604 |
End bp | 75749 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640481011 |
Product | efflux pump membrane protein |
Protein accession | YP_001165673 |
Protein GI | 146275512 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA CTGCGACACA AGCTGCCGAA GTCGATCCGG AACTGTCCGC CTTTCGCAAG GCACGCCGGA CGATGTGGCT CAAGCGCCTG GCCATCGTGC TCGCAGTGGT GGCTCTCGCA TGGGGTGCCT GGTACGTGCT GGTCGCCCGC AACTATGTCA GCACCGACAA CGCCTACGTA AATGCGCGAA TGGCGCAGGT CACGCCGCTG ATTGCTGGAT CGGCCATCGA GGTGCTGGTC GAAGATACGC AGCAGGTGAA GGCGGGTGAT GTCCTGGTCC GGCTCGACCA GGCCAACGCC AAAATCGCCG TCGCGCAGGC CGAAGCCGAT CTTGCCGCCG CCCGCCGCAA ATTCGGGCAG GCTGTCGCGA CCAACAGCGC GCTGTCGGCC CAGATCGACA CCTCAAGCGC CGGTCTCGTA CAGGCCCGGG CGCGACTTCG CACTGCAGAG TCCGAGTTCG ACAAGGCGCG GATCGACTTG CGGCGCCGTG AGGCCGTCAT TGCCAGCGGC GCGATCTCGG GTGAGGAACT GACCCAGGCG CGCAAGGCCT ACGCCTCCGC CAACGCGGCG CTCGAGGCGG CCCGCGGGGG CATCTCCGAA GTCACTTCGG CCCGACGGGT CGCGCAAGGG CAACTTGCCG CCAACGACGC CCTGGTGCGC GGCTCCAGCG TAGATACCGA CCCAGCGGTT CAGGCGGCCA AGGCCCGGCT CGATGCCGCC TTGCTCGACC TCCAGCGTAC CGAAATTCGC GCGCCGGTTT CCGGGGTGGT GAGCCGCCTG CAGATTCAGG TGGGACAGCG CCTGAGCCCC GGTCAGACTA TCATGACCAT CGTCCCGATC GACAAGCTCT ACGTCGATGC CAACTTCAAG GAAGGCCAAC TCGGCCGTGT CCGTCCTGGC ATGGCTGTAA CCCTCAAGTC GGATCTTTAT GGCGGCGATG TCGTCTACCA CGGCAAGGTC ACCGGGCTGG CCGGCGGTAC GGGATCGTCG ATGGCAATCA TCCCCGCCCA GAACGCCACC GGCAACTGGA TCAAGACTGT CCAGCGCCTG CCGGTGCGGA TCGAGCTTGA TCCTGCCGAA CTGCGCAAGC ACCCGTTGCG CGTCGGGCTG TCGATGGAAG TCGAGATCGA TGTTTCCGGT GAGTGA
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Protein sequence | MSDTATQAAE VDPELSAFRK ARRTMWLKRL AIVLAVVALA WGAWYVLVAR NYVSTDNAYV NARMAQVTPL IAGSAIEVLV EDTQQVKAGD VLVRLDQANA KIAVAQAEAD LAAARRKFGQ AVATNSALSA QIDTSSAGLV QARARLRTAE SEFDKARIDL RRREAVIASG AISGEELTQA RKAYASANAA LEAARGGISE VTSARRVAQG QLAANDALVR GSSVDTDPAV QAAKARLDAA LLDLQRTEIR APVSGVVSRL QIQVGQRLSP GQTIMTIVPI DKLYVDANFK EGQLGRVRPG MAVTLKSDLY GGDVVYHGKV TGLAGGTGSS MAIIPAQNAT GNWIKTVQRL PVRIELDPAE LRKHPLRVGL SMEVEIDVSG E
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