Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3900 |
Symbol | |
ID | 5077384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009426 |
Strand | - |
Start bp | 70009 |
End bp | 70533 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640481007 |
Product | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Protein accession | YP_001165669 |
Protein GI | 146275508 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.482414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGAAA CACGCAAGCC CGTAGGCATG GAACTGCATC ATGCCATCGT CAGTCACTAT TCCGCCGAGG TGCGGATGTT GCAAAACCAG CAATATCGCG AATGGTTCGA TACTGTAATC GCCGAAGATA TCCATTACTG GATGCCAGTT TACGAACAGC GGTTCGCACG TGACCGCCGC CCGGATCCAA CCCCGGGGGA TGCCGCAATC TACAACGATG ACTATGCCGA GCTGCAGCAG CGGGTCGACC GGTTGCTGAC GGGTCAGGTA TGGATGGAAG ATCCGCCATC ACGTATCCGC TATTTCGTCA CCAATGTCGA AGCATTCGAA ATTGCACCGT TTGAATTCGA GGTCTTCTCT AATGTTCTGG TGCACCGCAA TCGCCGACAG AGCGAAGTTT ACGTGCACAC GCTGGGACGC GAAGACAAGC TGCGGAAAAC AGGCAGCGGC TTCAAGGTAT TCAGCAGGAA GCTGAATATC GACGCGCGCG TCGTGCAGGA CAAGAATCTC TATTTCTTTG TATAA
|
Protein sequence | MTETRKPVGM ELHHAIVSHY SAEVRMLQNQ QYREWFDTVI AEDIHYWMPV YEQRFARDRR PDPTPGDAAI YNDDYAELQQ RVDRLLTGQV WMEDPPSRIR YFVTNVEAFE IAPFEFEVFS NVLVHRNRRQ SEVYVHTLGR EDKLRKTGSG FKVFSRKLNI DARVVQDKNL YFFV
|
| |