Gene Saro_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3900 
Symbol 
ID5077384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp70009 
End bp70533 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content53% 
IMG OID640481007 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001165669 
Protein GI146275508 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.482414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA CACGCAAGCC CGTAGGCATG GAACTGCATC ATGCCATCGT CAGTCACTAT 
TCCGCCGAGG TGCGGATGTT GCAAAACCAG CAATATCGCG AATGGTTCGA TACTGTAATC
GCCGAAGATA TCCATTACTG GATGCCAGTT TACGAACAGC GGTTCGCACG TGACCGCCGC
CCGGATCCAA CCCCGGGGGA TGCCGCAATC TACAACGATG ACTATGCCGA GCTGCAGCAG
CGGGTCGACC GGTTGCTGAC GGGTCAGGTA TGGATGGAAG ATCCGCCATC ACGTATCCGC
TATTTCGTCA CCAATGTCGA AGCATTCGAA ATTGCACCGT TTGAATTCGA GGTCTTCTCT
AATGTTCTGG TGCACCGCAA TCGCCGACAG AGCGAAGTTT ACGTGCACAC GCTGGGACGC
GAAGACAAGC TGCGGAAAAC AGGCAGCGGC TTCAAGGTAT TCAGCAGGAA GCTGAATATC
GACGCGCGCG TCGTGCAGGA CAAGAATCTC TATTTCTTTG TATAA
 
Protein sequence
MTETRKPVGM ELHHAIVSHY SAEVRMLQNQ QYREWFDTVI AEDIHYWMPV YEQRFARDRR 
PDPTPGDAAI YNDDYAELQQ RVDRLLTGQV WMEDPPSRIR YFVTNVEAFE IAPFEFEVFS
NVLVHRNRRQ SEVYVHTLGR EDKLRKTGSG FKVFSRKLNI DARVVQDKNL YFFV