| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3898 |
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| Symbol | |
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| ID | 5077382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | - |
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| Start bp | 66130 |
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| End bp | 68796 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640481005 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_001165667 |
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| Protein GI | 146275506 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTG TGTTTTCCTT CGGTTCCGGC GTTCTGGTCG CAGGTCAGAT TGGTCTCGAC
AAGCGCGTCT TGGGCGGGAA AGGGGCCAAC CTCGCCGAGA TGGCGCGGAT CGGGCTGCCC
GTCCCGCCTG GATTCACGAT TTCCGCCGGC GAATGCCTCG CTTATCTTGA CCACGGCAGA
GCTTCACTTG ATCGCATCCG CGATGAGGTT TCGGCTGCTT TGGGGCTGGT CGAACGGGCG
ACGGGCAAGA CGTTCGGCAA TCCTCGCGAT CCCCTGCTGG TCTCGGTGCG TTCGGGCGCG
CGGGTATCCA TGCCGGGGAT GATGGACACG ATCCTCAACC TTGGCATCAA TGATGCTACC
GTCACCGGCC TGGGCCAGTC CTCCGGGGAT GAGCGGTTCG CGCTCGACAG TTATCGCCGC
TTCATCCAGA TGTATTCCAG TGTCGTGCTC GAAATCGAGC ATGGCGTATT CGAGGCAGCC
CTTGACCGCA TCAAGGAAGA TCGCGGCGTC GATGAGGATA TCGATCTTCG AGTGGAGGAT
CTGCGCGGCG TGATCGCGAC CTTCAAGGAT CTCGTGCTTG CCCATCACGG CGCGGCCTTT
CCTCAGGATG TACAGGAACA ACTCTGGACG GCAATCGAGG CGGTGTTCCG CTCATGGGAC
TCACCGCGAG CCAAGGTCTA CCGGCGCCTG AACGATATCC CCGGAGATTG GGGCACGGCG
GTTAACGTCC AAGCCATGGT GTTCGGAAAT CTTGGCGAGA CCAGCGCTAC CGGCGTCGCC
TTTACCCGCA ACCCTGCAAC CGGCGAGAAG GCCTACTACG GCGAATGGCT GGCCAACGCC
CAGGGTGAGG ATGTTGTCGC CGGCATCCGC ACGCCCCAGT ATCTGACCAG GGCTGCCCGC
GAAGCCGCAG GTGCGCGGCT TCCCTCAATG CAGGAAGCGA TGCCGAAGGC CTATGCCCAA
CTTGCTGAGG TGTTCGAACT GCTGGAGCGC CACTATCGCG ACATGCAGGA CATCGAATTC
ACAGTCGAAC GCGGCAGGCT CTACCTCCTT CAGACCCGTT CGGGCAAGCG CACCGCCAAG
GCCGCGCTCA AGATTGCCGT CGACATGGTC GAAGAGAGCC TGGTCGACGA AGTGACCGCG
CTGCTCCGCC TCGACCCGGC CTCGCTCGAC CAGTTGCTTC ACCCCTCGCT CGATCCGAAT
GCCCCACGGG TGCTGCTCGG AAAGGGTTTG CCTGCCTCGC CCGGGGCAGC CTCGGGAGGT
GTGGTATTCG ATGCGGAAAC AGCGGCACGG TGGGCCGAAT TGGGAGAGAA GGTCATCCTC
GTCAGGCATG AGACGTCGCC TGACGACATC CATGGCATGC ACGTCGCAAC CGGCATCCTG
ACGGCGCGCG GCGGCATGAC CAGCCACGCG GCCGTGGTCG CGCGGGGTAT GGGCCGGCCA
TGCGTGGCGG GCACCGCGAG TCTCAAGATC GACCCGGTCG CGCGGGTCGC CGAGATCGGC
GGCCAGCGGC TCGAAGAGGG CGCATTCATC ACGATCGACG GTTCGACCGG CGAAGTGTTC
CTGGGCGAAC TGCCGACGAT CCTGCCCAAA CTTTCGGGCG ATTTCGCAAC GGTGATGGCA
TGGGCTGACA AGCATCGCCG CCTGAAGATT CGGACCAACG CGGAAACCCC GCTCGATTGC
GAAATGGCCC GCCGGTTCGG GGCCGAAGGG GTCGGGCTTT GCCGAACCGA GCACATGTTC
TTCGATGAAA GCCGGATCCT CGCCATGCGG CAGATGATCC TGGCCGACAG CGAAAAGGAA
CGACGCTCCG CGCTCGACCA GCTATTGCCC GAACAGCGCA CCGACTTCCG CCGGATCTTC
GAAATCATGG AAGGCTTGCC AGTCACCATC CGCCTCCTCG ATCCGCCGCT GCACGAGTTT
CTGCCGCATA CGGATAGCGA GTTCACCGAG CTTTCGCGGG CGATGGGTAT TGACGTGGAG
CAGGTTCGGC ATCGCGCAAT CGAATTGGCG GAAACCAACC CCATGCTGGG GCATCGAGGC
TGCCGACTGG GCGTGGTCTA TCCCGAAATA TACGAAATGC AGGCTCGCGC GATTTTCGAG
GCGGCGCTCG AAGTCGCGGG CGAGGCGGGC ATGGCGGTCT GTCCCGAAAT CATGATTCCG
CTGGTCGGAT TGCCGCGTGA ACTGGAATCA CTGAAGGATA CCCTGTACAG GGTCGCTGAA
GTCGTGTTCG CCGAAAAAGG CGAGCGGATC GCCTTTAGCG TTGGCACCAT GATCGAGCTG
CCGCGGGCAG CCCTGGTTGC CGACGAAATC GCTGCAAGCG GGGAATTCTT CTCGTTCGGA
ACCAATGATC TGACCCAGAC TACGCTGGGG ATCAGCCGCG ACGATGCGGC GCGTTTCCTG
GGTGCTTATG TGGAAAAAGG CATTATCGCC AAGGACCCGT TCGTCACCCT CGATATCGAA
GGGGTCGGCA AGCTGATCGA AATGGCATCG CGCAAAGGGC GCGAAACCCG GCCCGACCTA
AAACTGGGGA TCTGCGGCGA GCACGGCGGC GATCCGGCCA CGATCGCCTT CTGTGAGGAG
ATCGGGTTGG ACTATGTCAG CGCATCGCCT TTCCGGGTGC CGATTGCCCG ACTGGCTGCG
GCCCAGGCGG CGCTGGCGCC TTCATGA
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| Protein sequence | MSSVFSFGSG VLVAGQIGLD KRVLGGKGAN LAEMARIGLP VPPGFTISAG ECLAYLDHGR
ASLDRIRDEV SAALGLVERA TGKTFGNPRD PLLVSVRSGA RVSMPGMMDT ILNLGINDAT
VTGLGQSSGD ERFALDSYRR FIQMYSSVVL EIEHGVFEAA LDRIKEDRGV DEDIDLRVED
LRGVIATFKD LVLAHHGAAF PQDVQEQLWT AIEAVFRSWD SPRAKVYRRL NDIPGDWGTA
VNVQAMVFGN LGETSATGVA FTRNPATGEK AYYGEWLANA QGEDVVAGIR TPQYLTRAAR
EAAGARLPSM QEAMPKAYAQ LAEVFELLER HYRDMQDIEF TVERGRLYLL QTRSGKRTAK
AALKIAVDMV EESLVDEVTA LLRLDPASLD QLLHPSLDPN APRVLLGKGL PASPGAASGG
VVFDAETAAR WAELGEKVIL VRHETSPDDI HGMHVATGIL TARGGMTSHA AVVARGMGRP
CVAGTASLKI DPVARVAEIG GQRLEEGAFI TIDGSTGEVF LGELPTILPK LSGDFATVMA
WADKHRRLKI RTNAETPLDC EMARRFGAEG VGLCRTEHMF FDESRILAMR QMILADSEKE
RRSALDQLLP EQRTDFRRIF EIMEGLPVTI RLLDPPLHEF LPHTDSEFTE LSRAMGIDVE
QVRHRAIELA ETNPMLGHRG CRLGVVYPEI YEMQARAIFE AALEVAGEAG MAVCPEIMIP
LVGLPRELES LKDTLYRVAE VVFAEKGERI AFSVGTMIEL PRAALVADEI AASGEFFSFG
TNDLTQTTLG ISRDDAARFL GAYVEKGIIA KDPFVTLDIE GVGKLIEMAS RKGRETRPDL
KLGICGEHGG DPATIAFCEE IGLDYVSASP FRVPIARLAA AQAALAPS
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