Gene Saro_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3883 
Symbol 
ID5077367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand- 
Start bp52202 
End bp52705 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID640480990 
Producthypothetical protein 
Protein accessionYP_001165652 
Protein GI146275491 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.086934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCAGC ACGCGGCGGC GTTATGGGAC TATTCCTTAC ACATTTATGC CAAGCCGGGT 
GTGGCAGCTT CCTGCCTTGC CTTGCAGGAC CAGCATGGTT GTGACGTCAA CACGGTGTTG 
CTTTGCCTTT GGTTGGCAGG GGCGCGTAGC GCCATTCTCG CTGTTTCGGA CATCGAGGCC 
GCGCAGCACT CGGCAGCAAC TGCGAATGAA CGCTTCGTGC AACCGGTCCG TGCGGTGCGG 
CGCTGGATGA AGCAGTGGTG CCAAGGTACG CCTGAGTCGG AAATTAACGC CGCGGCTTAT 
GCGGCGCTGA AGACGGCAGA GTTGCATGGT GAACGTCTGG TCCAGTCCCA AATGCTCGCT 
GGGCTGGACC TGGACCAGTT GACCCGTGCC GAGTCGTCCG AAGCTGCAGT CCAGGCAAGC 
TTTGCCAACT ATTGTACCTT GGCGAGCACA TCTGGCGGAG TGGCAGAGGA ACTGGGTGAG 
CTTGTTGCCA GGGCCTGGCA TTGA
 
Protein sequence
MEQHAAALWD YSLHIYAKPG VAASCLALQD QHGCDVNTVL LCLWLAGARS AILAVSDIEA 
AQHSAATANE RFVQPVRAVR RWMKQWCQGT PESEINAAAY AALKTAELHG ERLVQSQMLA 
GLDLDQLTRA ESSEAAVQAS FANYCTLAST SGGVAEELGE LVARAWH