| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3877 |
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| Symbol | |
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| ID | 5077488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 47125 |
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| End bp | 48585 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640480986 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001165648 |
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| Protein GI | 146275487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.358634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA ACGATCTCCC TAACCGCGCC CGCTCGATCT CGTCGCTGCG CGACTTCCTC
GAACTGCTCG AGGATGCCGG CCAGGCGATC ACCTGGAGCG ATGCGGTGAT GCCCGAACCC
GGCGTGCGCA ACATAGCCGT CGCCGCATCG CGCGATGCCA ACGGCGCGCC GGCGATCGTA
TTCGACAATA TCACCGGTTA CCCCGGCAAG CGCTTGGCGG TGGGCGTCCA TGGTTCGTGG
GACAACATCG CCCTGCTGCT GGGCCGACCT AAAGGCACGA CCATCCGCGA GCTTTTCTTC
GAGATCGCCG GCCGCTGGGG CGATCAGGAA GCGCAAATCA GCTTTGTCCC AGAAGCCCAG
GCCCCGGTGC ACGAATGCCG GATCGAACAG GACATCAACC TTTACGATGT CCTGCCGGTC
TATCGGATCA ACGAATACGA TGGCGGGTTC TACATCGGCA AGGCCTCGGT CGCCTCGCGC
GATCCGCTCG ATCCAGACAA TTTCGGCAAG CAGAATGTCG GCATCTATCG CCTGCAGATC
CAGGGGCCGG ACACCTTCAC CCTGATGACG ATCCCCTCCC ACGACATGGG ACGTCAGATC
ATGGCGGCCG AACGGGAAGG CGTTCCGCTA AAGATTGCGG TCATGCTGGG TAATCATCCC
GGCCTTGCGG TGTTTGCTGC CACCCCGATC GGCTACGAGG AATCGGAATA TTCCTATGCC
TCGGCGATGA TGGGCGCGCC AATCCGGCTG ACCAAATCGG GCAACGGGAT CGACATCCTG
GCCGACAGCG AAATCGTGAT AGAGGCCGAA CTGCAACCGG GTGGACGCGA GCTGGAAGGG
CCGTTCGGCG AATTCCCCGG TTCCTACAGC GGCGTGCGCA AGGCGCCGAT CTTCAAGGTC
ACGGCGGTGT CGCACCGGCG CGATCCGATC TTCGAGAACA TTTACATCGG GCGCGGCTGG
ACCGAGCACG ATACGCTGAT CGGCCTGCAC ACCTCCGCCC CGATCTATGC CCAGCTGCGC
CAGAGCTTCC CCGAAGTCAC CGCGGTCAAC GCGCTTTACC AGCACGGACT GACCGGGATC
ATCTCGGTCA AAAACCGCAT GGCCGGCTTT GCCAAGACGG TCGCGCTGCG CGCGCTGAGC
ACGCCGCACG GCGTGATGTA CCTCAAGAAC CTGATTATGG TCGATGCCGA TGTCGATCCG
TTCGATCTCA ACCAAGTGAT GTGGGCGCTT TCGACCCGCA CCCGTGCGGA CGATATCATC
GTGCTGCCCA ACATGCCTGC CGTGCCGATC GATCCTTCGG CAGTGGTCCC GGGCAAGGGG
CACCGCCTGA TCATCGACGC GACCAGCTAT CTCCCGCCCG ATCCGGTGGG TGAAGCGCAC
CTTGTCACCC CGCCGACCGG GGACGAGATC GACGCCCTGA GCAAGCGGAT CCGCGAAATG
CAGCTGGGAG CCCTGTCATG A
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| Protein sequence | MTMNDLPNRA RSISSLRDFL ELLEDAGQAI TWSDAVMPEP GVRNIAVAAS RDANGAPAIV
FDNITGYPGK RLAVGVHGSW DNIALLLGRP KGTTIRELFF EIAGRWGDQE AQISFVPEAQ
APVHECRIEQ DINLYDVLPV YRINEYDGGF YIGKASVASR DPLDPDNFGK QNVGIYRLQI
QGPDTFTLMT IPSHDMGRQI MAAEREGVPL KIAVMLGNHP GLAVFAATPI GYEESEYSYA
SAMMGAPIRL TKSGNGIDIL ADSEIVIEAE LQPGGRELEG PFGEFPGSYS GVRKAPIFKV
TAVSHRRDPI FENIYIGRGW TEHDTLIGLH TSAPIYAQLR QSFPEVTAVN ALYQHGLTGI
ISVKNRMAGF AKTVALRALS TPHGVMYLKN LIMVDADVDP FDLNQVMWAL STRTRADDII
VLPNMPAVPI DPSAVVPGKG HRLIIDATSY LPPDPVGEAH LVTPPTGDEI DALSKRIREM
QLGALS
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