Gene Saro_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3853 
Symbol 
ID5077464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp21448 
End bp22386 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID640480962 
Productacetaldehyde dehydrogenase 
Protein accessionYP_001165624 
Protein GI146275463 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4569] Acetaldehyde dehydrogenase (acetylating) 
TIGRFAM ID[TIGR03215] acetaldehyde dehydrogenase (acetylating) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA TGAAGTGCGC AATTATCGGC TCCGGCAATA TCGGGACCGA CCTGATGATC 
AAGCTGCTCA AGGGTTCGGA TACACTGGAG CTAGCGGCGG TTGTCGGGAT CGATCCGGCC
TCCGAGGGGC TGGCGATGGC CAGCGAACGC GGCGTCCCGA CGACTCACGA AGGAATCGAG
GGCCTGTGCC GGATGCCGCA ATATGCCGAT ATCGGCATCG CCTTCGATGC GACCTCGGCC
TATGCGCACA AGGCGCACGA CGAAATCCTC GCCCGTGACG GCAAGCTGAT GGTCGACCTT
ACCCCGGCCG CGATCGGCCC GGCGACCATT CCCCCGGTCA ACCCGGCGGT CGATGCCGCG
GTGCGCAACA TCAACATGGT GACCTGTGGC GGGCAGGCGA CGATCCCGAT CGTCGCGGCG
GTCTCGCAGG TCGCCAAGGT GCACTACGCC GAAATCGTCG CGTCGGTTTC GTCGCGCTCC
GCCGGTCCCG GCACCCGTGC CAACATTGAT GAGTTCACCC GCACAACGGC GCGGGCGATC
GAAACTGTCG GCGGCGCGGC CAAGGGCCGG GCTGTGATCA TCCTTAATCC CGCCGAACCG
CCGATGATCA TGCGTGATAC GATCTTCACG CTGTCGGAAA TGGTCGATGA GGACAAGGTG
CGCGATTCGG TCCTGGCTAT GATTGCAAGG GTGCAGTCGT ACGTGCCGGG CTACCGGCTC
AAGCAGGAAG TACAGTTCGA ACGCTTTGGC TCGAACCGGC CGCTCAAGAT CCCCGGCTAC
GGTGAATTCG AAGGACTCAA GACCAGCGTG TTCCTCGAGG TCGAGGGCGC GGGCGATTAT
CTGCCCAACT ATTCCGGCAA CCTCGACATC ATGACCGCTG CCGCCAAGGC GGCAGGCGAG
AGCCTGGCCA AGACTCATAT GGAAAAGACC GCAGCATGA
 
Protein sequence
MAKMKCAIIG SGNIGTDLMI KLLKGSDTLE LAAVVGIDPA SEGLAMASER GVPTTHEGIE 
GLCRMPQYAD IGIAFDATSA YAHKAHDEIL ARDGKLMVDL TPAAIGPATI PPVNPAVDAA
VRNINMVTCG GQATIPIVAA VSQVAKVHYA EIVASVSSRS AGPGTRANID EFTRTTARAI
ETVGGAAKGR AVIILNPAEP PMIMRDTIFT LSEMVDEDKV RDSVLAMIAR VQSYVPGYRL
KQEVQFERFG SNRPLKIPGY GEFEGLKTSV FLEVEGAGDY LPNYSGNLDI MTAAAKAAGE
SLAKTHMEKT AA