Gene Saro_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3851 
Symbol 
ID5077462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp19648 
End bp20418 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID640480960 
Producthydratase/decarboxylase 
Protein accessionYP_001165622 
Protein GI146275461 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0976371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGGC TGGCGAAATA CGCGGAAATG CTCGACTCTG CACAGCGTAA AGCAACAGCT 
ACCCCGCAAA TCACCCCTGT GGACACCGCT TTCACGGTGG AAGAGGCCTA TCAGGTGCAG
AAGCTCTCGG TCGATCGGCG CCTGTCGCGC GGCGAACGGC GCATCGGCGT CAAGATGGGG
CTGACCAGCC GGGCCAAGAT GTTGCAGGTC GGCGTCGACG AAGTGGCTTG GGGCAGGCTG
ACTGATGCGA TGCTGGTCGA GGAAGGATCC GCCCTTTCGC GCGCGCGCTA CGTCCACCCC
CGGGTCGAAC CGGAAGTCGC CTTTCTGATG AAGGCCCCGC TGGTCGGTAA GGTGACTGCT
GCCGCTGCGC TGGCAGCAGT CGAAGCGATC GCCCCGGCGA TGGAGATCAT CGACAGCCGT
TACGAGAACT TCAAGTTCGC GCTCGAGGAC GTGATCGCCG ACAACACTTC CTCGTCGGGG
CTGGTGATCG GATCCTGGCA CGATCCCCGG ATCGATTTTT CGAATCTGGG CGTGATCCTC
GAAATCGATG GCGAAGTGGT ACAGGTCGGG TCGACCGCGG CGATCCTTGG CCACCCCATC
CGTTCGCTGG TTGCTGCGGC CCGGCTGGTT GCCGAAGCGG GCGAACAGAT CAACGCCGGT
GACATCGTCA TGGCTGGCGG CATCACCGCC GCGCCCAACC TGGCTCCCGG CCAGACCGTG
CGGACGACCG TGCAGAACCT TGGCGCGGTC ATGTTCCAGG TGGAGGCCTG A
 
Protein sequence
MDRLAKYAEM LDSAQRKATA TPQITPVDTA FTVEEAYQVQ KLSVDRRLSR GERRIGVKMG 
LTSRAKMLQV GVDEVAWGRL TDAMLVEEGS ALSRARYVHP RVEPEVAFLM KAPLVGKVTA
AAALAAVEAI APAMEIIDSR YENFKFALED VIADNTSSSG LVIGSWHDPR IDFSNLGVIL
EIDGEVVQVG STAAILGHPI RSLVAAARLV AEAGEQINAG DIVMAGGITA APNLAPGQTV
RTTVQNLGAV MFQVEA