| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3848 |
|---|
| Symbol | |
|---|
| ID | 5077459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009426 |
|---|
| Strand | - |
|---|
| Start bp | 17608 |
|---|
| End bp | 19113 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640480957 |
|---|
| Product | aldehyde dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001165619 |
|---|
| Protein GI | 146275458 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0362745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGC AGTTGAGAAG TGCAGAAAAC GAATACGGGA TCAAGTCCGA GTACGGCCAC
TATATCGGCG GCGAGTGGAT CGCCGGGGAC AGCGGCAAGA CCATCGATCT GCTCAATCCC
TCGACCGGCA AGGTGCTGAC CAAGATTCAG GCCGGCAACG CCAAGGATAT CGAACGCGCG
ATTGCCGCCG CCAAGGCGGC GTTTCCCAAG TGGTCGCAGA GCCTGCCCGG CGAGCGCCAA
GAAATCCTGA TCGAGGTTGC GCGTCGTCTG AAGGCACGCC ATTCGCACTA TGCCACCCTC
GAAACGCTCA ACAACGGCAA GCCGATGCGC GAATCGATGT ATTTCGATAT GCCGCAGACG
ATCGGGCAGT TTGAGCTGTT CGCCGGTGCC GCCTATGGCC TGCACGGCCA GACGCTCGAT
TATCCCGACG CGATCGGCAT CGTCCACCGC GAACCGCTCG GCGTCTGCGC GCAGATTATC
CCATGGAACG TGCCGATGTT GATGATGGCG TGCAAGATCG CGCCCGCGCT GGCCTCGGGC
AACACTGTCG TTCTGAAGCC GGCCGAAACG GTCTGCCTTT CGGTGATTGA ATTCTTCGTG
GAAATGGCTG ATCTGTTGCC GCCGGGTGTG ATCAACGTCG TCACCGGCTA TGGCGCGGAC
GTGGGCGAGG CGCTGGTCAC CAGCCCCGAT GTCGCCAAGG TGGCCTTCAC CGGTTCGATC
GCCACCGCGC GCCGGATCAT CCAGTATGCC TCGGCCAACA TCATCCCCCA GACGCTCGAG
TTGGGCGGCA AGTCGGCGCA CATCGTGTGT GGCGATGCCG ACATCGACGC GGCGGTGGAA
AGCGCGACTA TGTCGACCGT GCTCAACAAG GGCGAAGTCT GTCTGGCCGG TTCGCGCCTG
TTCCTGCACC AGTCGATCCA GGACGAGTTC CTGGCCAAGT TCAAGACCGC GCTTGAAGGC
ATCCGCCAGG GCGACCCGCT CGACATGGCG ACCCAGCTTG GCGCCCAGGC ATCGAAGATG
CAGTTTGACA AGGTGCAAAG CTACCTGCGC CTGGCCACCG AGGAAGGGGC CGAGGTCCTG
ACCGGCGGCA GCCGCTCGGA TGCCGCAGAT CTGGCCGATG GCAATTTTAT CAAGCCGACC
GTGTTCACCA ACGTCAACAA CTCCATGCGG ATCGCGCAGG AAGAGATCTT CGGACCGGTT
ACCAGCGTCA TCACCTGGAG CGACGAAGAC GACATGATGA AGCAGGCCAA CAATACAACT
TACGGCCTCG CTGGCGGCGT CTGGACCAAG GACATCGCCC GAGCCCACCG GATTGCGCGC
AAGCTCGAAA CTGGCACGGT CTGGATCAAT CGCTACTACA ACCTGAAGGC CAACATGCCG
CTGGGCGGTT ACAAGCAAAG CGGCTTCGGG CGTGAATTCA GCCATGAAGT GCTGAATCAC
TACACCCAGA CCAAGTCGGT GGTGGTCAAC CTCCAGGAAG GTCGCACCGG AATGTTCGAT
CAGTGA
|
|---|
| Protein sequence | MATQLRSAEN EYGIKSEYGH YIGGEWIAGD SGKTIDLLNP STGKVLTKIQ AGNAKDIERA
IAAAKAAFPK WSQSLPGERQ EILIEVARRL KARHSHYATL ETLNNGKPMR ESMYFDMPQT
IGQFELFAGA AYGLHGQTLD YPDAIGIVHR EPLGVCAQII PWNVPMLMMA CKIAPALASG
NTVVLKPAET VCLSVIEFFV EMADLLPPGV INVVTGYGAD VGEALVTSPD VAKVAFTGSI
ATARRIIQYA SANIIPQTLE LGGKSAHIVC GDADIDAAVE SATMSTVLNK GEVCLAGSRL
FLHQSIQDEF LAKFKTALEG IRQGDPLDMA TQLGAQASKM QFDKVQSYLR LATEEGAEVL
TGGSRSDAAD LADGNFIKPT VFTNVNNSMR IAQEEIFGPV TSVITWSDED DMMKQANNTT
YGLAGGVWTK DIARAHRIAR KLETGTVWIN RYYNLKANMP LGGYKQSGFG REFSHEVLNH
YTQTKSVVVN LQEGRTGMFD Q
|
|---|
| |