Gene Saro_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3838 
Symbol 
ID5077449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp4755 
End bp5981 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID640480948 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001165610 
Protein GI146275449 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGA TAGCCGTGGT CGGAGCAAAT CTTGCGGGTG GCCGCGCGGT GGAGTCCTTG 
CGCCAGGCTG GCTTCGATGG CCGGATCACC CTTATCGGCG AAGAACCGTG GCGGCCCTAC
GAGCGCCCGC CCCTGTCCAA GGAGGTGTTG TGGGATCCGG CCAATGTACC GGACAATTTC
TTCCTTCATG ACGAGGCCTG GTACGCCGCC AACCGCATCG AAATGCGGCT TGGCACGCGT
GCCGAAGCGC TCGACCTGGC GGCGAGCGCT GTGCGCCTGA CGGGCGGAGA CCTGGTCCAA
GCCGACCGCA TCCTGCTGAC CACCGGTGGT TCCGCCCGCA AGCTCAACAT GGAGGGTGCC
GACGCCGCCA ACGTGCATTA CCTGCGCACC CGGGACGATG CCACCCGGAT GGCGACGGAC
CTCAGGGACG GCGCCCGGAT CGTCATCATC GGCATGGGTG TGATCGGGGC TGAAGTCGCG
GCCAGCGCGG TCAAGCTGGG GTGCCGAGTG ACCGCGATCG AACCGCTTGC CGCGCCTATG
ATTCGCGCGC TCGGGCCGCA GTTCGGGCAA TGGCTGGGCG AGGAACATCG CCAGCGCGGC
GTCGACACCC GCTTCGGACG CGGCGTGAAC GCGATGAAGG TGCTTGACGG GCGGGTGACG
CAGGTCGAAC TCGATGACGG ATCACTGGTG GATTGCGATG CCGTGGTAGT CGGGGTCGGG
ATAGTGCCAG AAATCAGCCT AGCCCGGGAC GCAGGCATCG TCACCAATAA CGGCATTATC
GTCGATAGGC AGTGCCGCAC CAGCAATGAG AATGTCTTTG CCGCCGGCGA CGTCGCCGAA
CAGGACAGCT TCTTCGGCGG TCATATCCGC CAGGAAACCT ACCAGAACGC TGCCGACCAG
GCCCAGGCCG CAGCGCTCGC GATGCTCGGG CAGGACGTCG ATTACTGCAA GCCGGTTTGG
TACTGGAGCG ATCAGTTCGA TCTCAACATC CAGTTCTGCG GCCATATCCC GGTGCAAGCC
GAGGTAACCC TGCGCGGAGA CATGGCAAGC AACCAGTTTA CCGCATTCTT CCGGTCAGGC
GAGACGATCG AGGGCATCCT GACTGTCAAC CGCGCCCCGG ACATGGGCAT CGGCAAACGG
CTGATCGAGC GCCGGGCCAG AGCCCAGGCG GCGCAGCTGG CCGATGCCGA TGTGTCGCTC
CGCGAAATCC TCAAGCAGGC TGGTTAG
 
Protein sequence
MKSIAVVGAN LAGGRAVESL RQAGFDGRIT LIGEEPWRPY ERPPLSKEVL WDPANVPDNF 
FLHDEAWYAA NRIEMRLGTR AEALDLAASA VRLTGGDLVQ ADRILLTTGG SARKLNMEGA
DAANVHYLRT RDDATRMATD LRDGARIVII GMGVIGAEVA ASAVKLGCRV TAIEPLAAPM
IRALGPQFGQ WLGEEHRQRG VDTRFGRGVN AMKVLDGRVT QVELDDGSLV DCDAVVVGVG
IVPEISLARD AGIVTNNGII VDRQCRTSNE NVFAAGDVAE QDSFFGGHIR QETYQNAADQ
AQAAALAMLG QDVDYCKPVW YWSDQFDLNI QFCGHIPVQA EVTLRGDMAS NQFTAFFRSG
ETIEGILTVN RAPDMGIGKR LIERRARAQA AQLADADVSL REILKQAG