| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3837 |
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| Symbol | benD |
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| ID | 5077448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 3947 |
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| End bp | 4735 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640480947 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001165609 |
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| Protein GI | 146275448 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG CGAACGGCAG ATTTGCAGAC AAGATCGCAG TTGTCACAGG AGCAGCCCAG
GGGATCGGCT TTGCTACCGC CCAGCGCCTA GGGCGAGAAG GGGCCACAGT CGTGGTTGCC
GATCGTGCAG AACAGGCGAC ACTGGATGCG GTTGCGCGAC TTATGGCCGA ATCTGTCGAC
GCGCACCCCG CCATCCACGA CCTTGAGCAA CAGACTGGAG CCGCTGCCCT GTATAACGCT
GTAAGCGATA AATTCGGGCG GATCGACGTG GCCGTCCATA ATGTAGGTGG CACGATCTGG
GCCAAGCCCT ATTGGGAATA CACCACCGAA GAAATCGTCG CCGAGATTAA TCGCTCGCTG
TGGCCGACGC TGTGGTGCTG CCATGCAGTG CTGCCCCACA TGCGCGCGGC AGGTCGCGGC
GCGATTGTCA ACATCGGCTC GGTGGCAACG CGCGGGGTCA ATCGCGTGCC CTACGCGGCT
GCGAAAGGCG GCGTGGCGGC GCTGACCGCT GCGTTGTCTC TGGAATTGGA GGATTGTGGC
ATCAGGGTAA ATTGCGTGGC TCCCGGCGGG GTCAACGTGA CCCGTGTCAC CCCGCGCAAC
ACCGCTCCGC ATTCCGACGC GGACCGCAAA GGCTTTGGCG AAGTGATGGA GCAGACCTTG
CGCGATACCC CGCTGGGCCG CTTCGGCGAG CCCGAGGAAC TGGCCGCCGC AATCTGCTTT
CTCGCCGCTG ACGAGGCGTC CTACATCACC GGCCAGACGC TCTACGTCGC AGGTGGCGGG
ATCGGCTGA
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| Protein sequence | MTDANGRFAD KIAVVTGAAQ GIGFATAQRL GREGATVVVA DRAEQATLDA VARLMAESVD
AHPAIHDLEQ QTGAAALYNA VSDKFGRIDV AVHNVGGTIW AKPYWEYTTE EIVAEINRSL
WPTLWCCHAV LPHMRAAGRG AIVNIGSVAT RGVNRVPYAA AKGGVAALTA ALSLELEDCG
IRVNCVAPGG VNVTRVTPRN TAPHSDADRK GFGEVMEQTL RDTPLGRFGE PEELAAAICF
LAADEASYIT GQTLYVAGGG IG
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