| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_4308 |
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| Symbol | |
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| ID | 5110354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009425 |
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| Strand | + |
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| Start bp | 132674 |
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| End bp | 135196 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640480925 |
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| Product | Type IV secretory pathway VirD4 components-like protein |
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| Protein accession | YP_001165587 |
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| Protein GI | 146284634 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | [TIGR02759] type IV conjugative transfer system coupling protein TraD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0280519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT ACCGCTGGCG CATGTTCCTT CAGGTGAATA ACTGGATTGG TTTCTGGATT
TTCATTTTGT TCGCCGTGCT GGCGTCCGCC ATTTTCTTCT GGCGCATTCC CCAGGAAACC
CTCGATAACG GCTCCCTGTG GTGGTTCGCG TGGATGAACA GCAGTTTTAT CGATCTGATG
CCAGCCAGCG CCCCGAAACT CTACGACATT CACTACTGGT ACGCGCCGAC GCAGACGCCG
ATGGTGCTGA AAATGACCCT CGCGCAAATC TTTACCGACC CCTACATGAC GGCAATGGGC
GATCAGGTGC TCAGTGAGCT GCAGTGGGCT GGCCTGGCAA GCGGCGTGTT CAGTATGGCG
GTTTTTCTGG CCGTCACCTG GTACATCGTG GGGATAGGGC GTCGTGAGAG CGAGGATGAA
TATCTCTCAG GTATGACGCT GACCGACAAA GCCGCCGACG TTAACCAGCT GCTGCGCCGG
AACGGGGAGT TGTCTGACCT GCGCGTGGGT GACCTGCACA TGGTCAGAAT GGCGGAGGTC
ATGAACTTCC TGATGCACGG GACCATCGGG GTGGGTAAGT CGACCCTCAT CCGCTGGCTG
CTGGATTACA TCCGTAAACG CGGTGACCGG GCCATTATTT ACGACTCCGG CTGTACCTTC
ACCGAAACCC ACTACAACCC CGATACCGAC TTCATTCTTA ACGCGCACGA CGATCGCTGC
GCGAACTGGC AGCTGTGGGG CGAGTGCGTC GATGCCGTTG ATTACGACAA TATGGCGTCG
AGCCTGATCC CCGTGGAAGG TGAATCGGAC CCGTTCTGGG TCTCCAGCTC GCGCACCATC
TTTGCGGACC TGGCGATTCG GATGTCGGTT GACCCGGACC GCAGTATTGA GAAATTCCTC
AAAACCCTGC TGTCACTCAG CATGAAAAGC CTGCGTGAGT ATCTGGCTAA CACGCCGTCG
GCCAACCTGG TTGAGGAGAA AATCGAAAAG ACCGCCATCT CCATCCGTTC TGTCGTCACC
AACTATGCGA AGTCGCTGCG CTACCTGCAG GGGCTGGATG ATGGCGTCAA ACCACCGTTC
ACCATCCGCG AATGGATGAC AAAAGAGGAG CATGACAGCA GCTGGCTGTT TATCTCCACT
CAGGCCCGGC ACCGTAAAAG CGTGCGACCG CTCATTTCCC TGTGGGTGTC ACTGGCCACC
ATGATGCTGC AGAGCATGGG GGAGAACAGC GATCGTCGCG TCTGGTTCAT CTACGATGAA
ATCCCGAGCC TGCAGCGTAT TCCTGAGCTG GCAGAAACTC TCGCGGAAGC CCGTAAGTTT
GGCGGGTGCT TTGTACTGGG CATGCAGAAC ATGGCGCAGC TGGTCCACGT CTACGGCCGG
GAACTGGCCA AAAGTATTTT CGACCTGATG AACACCCGTA TGTACGGTCG CTCCCCGAGC
GCCGAGATGG CCAAAGTGGT GGAGGAGGAG CTGGGTAACC AGCGTAAACG CAAAATCCGG
GAGCAGAACA GCTACGGTCT GGACCAGGTG CGTGACGGTG TGTCGCTCGG CAAGGATGAG
GTCAATAACC CGATAGTGGA TTACGAGCAG GTGATGCGCC TGCCCAACCT GAATTTTTAC
GTGCGCCTGC CGGGTGAGTA TCCGGTAGTG CGCCTGAAGC TGAAATACCG TGAGCAGAAG
AAGCACCACC CTGGCCTGAT AGAGCGCAAT ATCCACGACG CCCTGAGTCC GGAGCTGGAA
AAGGTGATTC AGGCCAATGA ACGGGCGGCC TCCGTCGCGG GCCTTGCCTT CCCGACCGGT
GATGAGGTGC TGGAGAAAGG CAGTAACAGT GAAACCGCCA CCACGATAAA CACGCCGGCA
ACGGTCCGGC AAACGCCTGT GGTGGCAAAA CCCGTGACTG CCTCGGCGAT ATCGCAGAAA
CCTGCGCCGG CCGTGACCGC CGTGAATAAG CCCGATGAGC CGGTTTTACC GGTTAAACAC
AGTCCGGTGA CACCCCCTGC CACTGAACCT GAAAAAAACA ACCTGGTATC GCTTCACAGT
ATCCGTCAGA CCGCGCCTTC CCCGGACAGT GGTCTTCCTG TCGCAGAAAC ACCTTCTGAG
CACGCTGTGT CTTCTGCACC CTCTGAAGCG GCAGCCTCAG TTGTCCCTTC GGTTGCATTA
CCTGCAGCCC TGCAAAGTCT GCGTAACCGC CCCGTTTCGC CTGAGCCAGC GCCGACGTCC
GCCCTTGGCA TGCTGCAAAA AGCCCGTCAG CGCCCGGTCA ACACGGAAAG CGATCAGCAG
GGTGAGGATA ATGCCGGCGG GGAATCCATG AATCTCGAGA TGCATGTCTC TGAACGGGCA
GACGGTGGCC TGAGCATCAC GACGGCAGGT CACCCTCCCG AGCCTGAACA CGCGGCTGAA
ACCCATCGTG TCAGCCGGCA ACTGGCCCAG GAAGAAGAGA ACATTTTACG TCACCGTGAG
CCGGACGATC CGGGTTACAG CGATTACGAC CAACACTACG ATGACAGAGA GCCAGACCTA
TGA
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| Protein sequence | MTAYRWRMFL QVNNWIGFWI FILFAVLASA IFFWRIPQET LDNGSLWWFA WMNSSFIDLM
PASAPKLYDI HYWYAPTQTP MVLKMTLAQI FTDPYMTAMG DQVLSELQWA GLASGVFSMA
VFLAVTWYIV GIGRRESEDE YLSGMTLTDK AADVNQLLRR NGELSDLRVG DLHMVRMAEV
MNFLMHGTIG VGKSTLIRWL LDYIRKRGDR AIIYDSGCTF TETHYNPDTD FILNAHDDRC
ANWQLWGECV DAVDYDNMAS SLIPVEGESD PFWVSSSRTI FADLAIRMSV DPDRSIEKFL
KTLLSLSMKS LREYLANTPS ANLVEEKIEK TAISIRSVVT NYAKSLRYLQ GLDDGVKPPF
TIREWMTKEE HDSSWLFIST QARHRKSVRP LISLWVSLAT MMLQSMGENS DRRVWFIYDE
IPSLQRIPEL AETLAEARKF GGCFVLGMQN MAQLVHVYGR ELAKSIFDLM NTRMYGRSPS
AEMAKVVEEE LGNQRKRKIR EQNSYGLDQV RDGVSLGKDE VNNPIVDYEQ VMRLPNLNFY
VRLPGEYPVV RLKLKYREQK KHHPGLIERN IHDALSPELE KVIQANERAA SVAGLAFPTG
DEVLEKGSNS ETATTINTPA TVRQTPVVAK PVTASAISQK PAPAVTAVNK PDEPVLPVKH
SPVTPPATEP EKNNLVSLHS IRQTAPSPDS GLPVAETPSE HAVSSAPSEA AASVVPSVAL
PAALQSLRNR PVSPEPAPTS ALGMLQKARQ RPVNTESDQQ GEDNAGGESM NLEMHVSERA
DGGLSITTAG HPPEPEHAAE THRVSRQLAQ EEENILRHRE PDDPGYSDYD QHYDDREPDL
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