Gene Ent638_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_4265 
Symbol 
ID5110440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009425 
Strand
Start bp91470 
End bp93563 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content54% 
IMG OID640480882 
ProductTPR repeat-containing protein 
Protein accessionYP_001165544 
Protein GI146284591 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAATA ACACCCCTCT TTATCCGCAA CAGCTAACGG TTCATCAGGC TATGGAACTG 
GCGAATGCAC ACTGGAATGC GGGTCAGGCA GCACAGGCAG AGCAGCTTTG TTTGCGTGTT
CTTCAGGTTG CCCCTTCGCA GCCCGATGCT CTTAATCTTT TAGGCTTGAT GATGCATGCC
TACGGCAAGA TGGATCTGGC CCTCGACTAC ATACGTAAAG CTGGGCAGTC GCCGGGTGCA
CCGGCGATAG TGTTCAGCAA TCTGGCCGAG CTTTGCCGCC AAAGGGGGTT ATTACAGGAA
GCAGAACAAG CCGCCCGGCG AGCAGTAGAA CAAGAGCCGC AACTGGCTTT GGCATGGAAT
AACCTTGGCA TCATTTTGCA GGAGGCAGGG AAATTTAAGG CCAGCCTTGA GTGCCTGCAA
TACGTGGCAT CGCTGCAACC AGACAATGCT GAGGTGCACA ACAATCTGGC CAATACCTGG
AAGCGCCTGG GTGACTTGCA ACGCGCTCAG GAAAGTTACC AGCGTGCGCT GAATTTACGA
CCTGATTACG CAGAGGTCTA CAGTAATCTC GCCTCGCTGT TAAGTGAGTT GGGATGTATT
GATGAGGCTG CGGCTTCTGC CAGACAGGCA ATAGATATCA ACCCGCAACT GGCTGATGCC
TACCTGAATC TGGCGGATAT TGAATTGTCG CGTATGCGCT ACGCAGAAGC ATCGCATTGG
GTTAAAGCAC TTCTGGAGTT TTCGCCCCGA CATGCGGGGG CGCTTATCAC TCTTGCCCAT
ATCATGATAG CTAATGAGCA TTATGAAGAG GCGGCCTTCG AAGCACGCAA GGCGCTGGCC
ATCGCCCCGG ACAGGGCTAA TGCGCATATG ATCCTGGGTA AAGCATTGCA GGCGCTTGGG
CAGTATGAAG ACGCAGACAG AGCTTATAGT AAGGCAGCGG TATTACCAGG CACGGTTGCT
GAAGAGGCCC TGATTGCGCG CGCGGTTTTG CTGATGGAAA CCGGTGATAA GCAAGCCGCT
ACGGCGGCGT TTGAACAGGC CTTGAAACGT TTTCCAGATT CAGCGCGGAT TGTCGCTGCG
CGTTGTGACA ATAAGTTCTA TCGTGCCGGC GACCCTGACA TTGATGTGAT GGAGAGCGCA
TTGGTCAGCG AGCCAACGCC TCCACTTAAT GAAAAAATGA TGCTGCATTT TTCGCTGGGC
AAAGCCTGGC TTGATGTTAG CGATTCCGAA CGCGCATTTT TTCATCTGAA TCAGGGCAAC
GCCCTCAAGC GTGCCTCTTT TCATTACGAT GCCGCTCAAA CCCGTGCGTG GGTGAACAAC
ATTGCGGAGA TTTTCACGCC AGCCTTGATG GCGCAGTTCA ACAACGCGGG CACGGCTTCT
GAGCGGTCGG TCTTTGTCGT CGGGATGCCT CGCTCTGGCA CCACTCTGGT TGAGCAGATT
CTGGCCTCAC ATCCCGGTGT TTACGGTGCA GGGGAGTTGC GTGCACTGGA TCGGGCTGTG
GCACGCGCAG GCCGATTCCC CGATGATGTA CCACGCTGGA ATAATGCTGA CTTTGCTCGT
ATTGGGACAG ACTATCTGGA GCAGGTGAGT CACCTGGCAC CGGAGGCATT GCGCGTGATC
GACAAGCTGC CTGCGAACTT CTTTTATGCC GGACTGATTC CACTTCTTCT GCCTGGCGCG
CGCATCATCC ATTGCCGCCG TAACCCTGTT GATACGTGCT TATCCTGTTA CAGCAAGCTG
TTTGCTGGCG AACAGACATT CGCTTATCAA CTGGATGAGC TGGGTCAGTT CTACCGTGAT
TATGAGGCGT TGATGGCCCA TTTTCGCCAG ATACTGCCAG CTGACAGCTT CATTGAAGTC
GACTATGAGA CTGTGGTCGA CGATCTTGAA GGGCAGGCGC GGCGCCTGAT TGATTTTATC
GCTCTTCCCT GGGACGACGC CTGTCTGACC TTCCACGAAA CTCGCCGTAT CGTGCGCACG
GCAAGCGTTG CCCAGGTGCG TCAGCCGATC TATACCTCCT CTAAAGGACG CTGGCAACAA
CATGCTGCAC ACCTCGGTCC CTTGTTAAAA GCACTGGGGA TGGAGCAGAA ATGA
 
Protein sequence
MSNNTPLYPQ QLTVHQAMEL ANAHWNAGQA AQAEQLCLRV LQVAPSQPDA LNLLGLMMHA 
YGKMDLALDY IRKAGQSPGA PAIVFSNLAE LCRQRGLLQE AEQAARRAVE QEPQLALAWN
NLGIILQEAG KFKASLECLQ YVASLQPDNA EVHNNLANTW KRLGDLQRAQ ESYQRALNLR
PDYAEVYSNL ASLLSELGCI DEAAASARQA IDINPQLADA YLNLADIELS RMRYAEASHW
VKALLEFSPR HAGALITLAH IMIANEHYEE AAFEARKALA IAPDRANAHM ILGKALQALG
QYEDADRAYS KAAVLPGTVA EEALIARAVL LMETGDKQAA TAAFEQALKR FPDSARIVAA
RCDNKFYRAG DPDIDVMESA LVSEPTPPLN EKMMLHFSLG KAWLDVSDSE RAFFHLNQGN
ALKRASFHYD AAQTRAWVNN IAEIFTPALM AQFNNAGTAS ERSVFVVGMP RSGTTLVEQI
LASHPGVYGA GELRALDRAV ARAGRFPDDV PRWNNADFAR IGTDYLEQVS HLAPEALRVI
DKLPANFFYA GLIPLLLPGA RIIHCRRNPV DTCLSCYSKL FAGEQTFAYQ LDELGQFYRD
YEALMAHFRQ ILPADSFIEV DYETVVDDLE GQARRLIDFI ALPWDDACLT FHETRRIVRT
ASVAQVRQPI YTSSKGRWQQ HAAHLGPLLK ALGMEQK