| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_R0042 |
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| Symbol | |
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| ID | 5059965 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4009431 |
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| End bp | 4012538 |
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| Gene Length | 3108 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640475745 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.448799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00833876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GGTCAAGTTG TCAAGGGCGA ACGGTGAATG CCTTGGCACC AGGAGCCGAT GAAGGACGTG
GGAGGCCGCG ATAGGCCTGG GGGAGCTGTC AACCGAGCTG TGATCCCAGG GTGTCCGAAT
GGGGGAACCC GGCATCAGTC ATGTGGTGTC ACCTGCACCT GAACTCATAG GGTGTGTGGA
GGGAACGCGG GGAAGTGAAA CATCTCAGTA CCCGTAGGAA GAGAAAACAA TATGTGATTC
CGTGAGTAGT GGCGAGCGAA AGCGGATTGG GGCTAAACCG GCGGCGTGTG ATACCTGTCA
GGGGTTGCGT GGTCGGGGTT GTGGGATCCT GCGACACGGG CTGACACTCG TGTGGGGAGT
GATAAAGCTG GTGGTTAGTT GAACAGTCTG GAATGGCTGA CCGTAGACGG TGAAAGTCCG
GTAGGTGAAA ACTGCTAGTC TCCTGTGGGT GTTCCCGAGT AGCGGCGGAC TCCTGTAATC
TGCCGTGAAT CTGCCAGGAC CATCTGGTAA GCCTAAATAC TTCCTGGTGA CCGATAGCGG
ATAGTACCGT GAGGGAATGG TGAAAAGTAC CCCGGGAGGG GAGTGAAATA GTACCTGAAA
CCGTTCGCCT ACAATCCGTC GGAGCCTTTA GGGGTGACGG CGTGCCTTTT GAAGAATGAG
CCTGCGAGTT AGTGGCATGT GGCGAGGTTA ACCCGGGTGG GGGAGCCGTA GCGAAAGCGA
GTCTGAATAG GGCGTCAGAG TCGCGTGTCC TAGACCCGAA GCGGAGTGAT CTAGCCATGG
GCAGGCTGAA GCGTGGGTAA GACTGCGTGG AGGGCCGAAC CCACCAACGT TGAAAAGTTG
GGGGATGACC TGTGGTTAGG GGTGAAAGGC CAATCAAACT CCGTGATAGC TGGTTCTCCC
CGAAATGCAT TTAGGTGCAG CGTCGTGTGT TTCTTGCCGG AGGTAGAGCA CTGGATGGTC
TAGGGGGCCT ACAAGCTTAC TGAAATCAGC CAAACTCCGA ATGCCGGTAA GTGAGAGCGC
GGCAGTGAGA CTGCGGGGGA TAAGCTTCGT AGTCGAGAGG GAAACAGCCC AGATCACCAG
CTAAGGCCCC TAAGCGTGTG CTAAGTGGAA AAGGATGTGG GGTCGCATAG ACAACCAGGA
GGTTGGCTTA GAAGCAGCCA TCCTTGAAAG AGTGCGTAAT AGCTCACTGG TCAAGTGGTT
CCGCGCCGAC AATGTAGCGG GGCTCAAGCA CACCGCCGAA GCTGTGGCAT TCACGCGTGT
ACTTCGCATG GCCTTTTGGG GTTGTGTGTA GGTGTGTGGA TGGGTAGGGG AGCGTCGTGC
CGGGGGTGAA GCAGCCGAGT GATCGAGTTG TGGACGCGGT GCGAGTGAGA ATGCAGGCAT
GAGTAGCGAA AGAAGGGTGA GAAACCCTTC CGCCGGATGA CCAAGGGTTC CAGGGCCAGG
TTAATCCGCC CTGGGTGAGT CGGGGCCTAA GGCGAGGCCG AGAGGCGTAG TCGATGGATA
ACGGGTTGAT ATTCCCGTAC CCGCGAAGGA GCGTCCCTGA TGAACCTCGT TGTGCTAACC
ATCCGATCTT GGTGTGGTCT TCGGACTGTG CTGGGGGAGC GTGGGAACCT GGCGGGTAGT
AGTCAAGCGA TGGGGTGACG CAGGAAGGTA GCTGAGCCCG GCCGGTGGTT GTGCCGGGGT
AAGCGTGTAG GCTGTGTCGT AGGTAAATCC GCGGCGCGTG TGGCTGAGAC GTGATGCCGA
GCCGATTCAG GTGAAGTCAG TGATCCTATG CTGTCGAGAA AAGCCTCTAG CGAGTTCCGA
GCGGCCCGTA CCCTAAACCG ACACAGGTGG TCAGGTAGAG AATACCAAGG CGATCGGGTG
AACTGTGGTT AAGGAACTCG GCAAATTGCC CCCGTAACTT TGGGAGAAGG GGGGCCGGAG
ACGTGAAGGC ACGTGCTGCT GGAGCGTTGT ATGGCCGCAG AGAGCAGGGG GAAGCGACTG
TTTACTAAAA ACACAGGTCC ATGCGAAGAA GTAATTCGAT GTATATGGAC TGACGCCTGC
CCGGTGCTGG AACGTTAAGG GGACCTGTTA GTCTTTCGGG GCGAAGCGGA GAACTTAAGC
GCCAGTAAAC GGCGGTGGTA ACTATAACCA TCCTAAGGTA GCGAAATTCC TTGTCGGGTA
AGTTCCGACC TGCACGAATG GCGTAACGAC TTCCCCACTG TCTCAACCAC AGGCCCGGCG
AAATTGCATT ACGAGTAAAG ATGCTCGTTA CGCGCGGCAG GACGGAAAGA CCCCGGGACC
TTTACTATAG CTTGACATTG GTATCTGAAT TAGCTTGTGT AGGATAGGTG GGAGCCTGTG
AAGTGTGCAC GCCAGTGCAT GTGGAGGCAA TCTTGAAATA CCACTCTGGT TGGTTTGGGT
ATCTAACTTC GGACCGTTAT CCGGTTCAGG GACAGTGTCT GGTGGGTAGT TTAACTGGGG
CGGTTGCCTC CTAAAGGGTA ACGGAGGCGC CCAAAGGTTC CCTCAGCCTG GTTGGCAATC
AGGTGTTGAG TGTAAGTGCA CAAGGGAGCT TGACTGTGAG ACTGACGGGT CGAGCAGGGA
CGAAAGTCGG GACTAGTGAT CCGGCACTGG CATGTGGAAG CGGTGTCGCT CAACGGATAA
AAGGTACCCC GGGGATAACA GGCTGATCTT CCCCAAGAGT CCATATCGAC GGGATGGTTT
GGCACCTCGA TGTCGGCTCG TCGCATCCTG GGGCTGTAGC AGGTCCCAAG GGTTGGGCTG
TTCGCCCATT AAAGCGGTAC GCGAGCTGGG TTTAGAACGT CGTGAGACAG TTCGGTCCCT
ATCCGCCGTG CGCGTAGGAT ACTTGAGAAG GGCTGTCCCT AGTACGAGAG GACCGGGACG
GACGAACCTC TGGTGTGCCA GTTGTCCCGC CAGGGGCACG GCTGGTTAGC TACGTTCGGA
AGGGATAACC GCTGAAAGCA TCTAAGCGGG AAGCCTGCTT CAAGATGAGG TATCCCACCC
ACTTTGTGGG GTAAGGCCCC CAGCTAGACG ACTGGGTTGA TAGGCCGGAA ATGTAAGCTC
GGTAACGGGT TCAGTTGACC GGTACTAATA GGCCGAGGAC TTGACTAC
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| Protein sequence | |
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