Gene Strop_4592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4592 
Symbol 
ID5061082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5182678 
End bp5183088 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content73% 
IMG OID640476859 
Productribonuclease P protein component 
Protein accessionYP_001161398 
Protein GI145597101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000331999 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000978361 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTGACCG CCGCGCAGCG TCTGCGGCGC AGCACTGATT TCGCCGCGGC GGTCCGTGGT 
GGCCGACGCG TCGGGCGCGG CGTGGTCGTC GTCCATCTGA CCTTGCCCGG CACCCTGCCG
GATGTCTCTT CGTCGAAACC GGCGCGGGAC ACTGGTGCGG AGCAGACATC CGCACCAGCC
CGCGCCGGTT TCGTCGTCTC CAAGGCGGTT GGCAACGCTG TCGTCCGCAA CGCTGTCCGC
CGGAGACTGC GGCACCTGGT CCGGGAACGC CTTCCCGGAC TGCCGGCCGG GAGCACCCTC
GTCGTCCGCG CCCTGCCCAC CGCGGCGCAC CGGTCGTACC AACGGCTCGG TGTCGATCTC
GACGCCGCGA TCGCGGCTGC ACGCGCCCCC CGCGGGCGGC GGTCCCGGTG A
 
Protein sequence
MLTAAQRLRR STDFAAAVRG GRRVGRGVVV VHLTLPGTLP DVSSSKPARD TGAEQTSAPA 
RAGFVVSKAV GNAVVRNAVR RRLRHLVRER LPGLPAGSTL VVRALPTAAH RSYQRLGVDL
DAAIAAARAP RGRRSR