| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4581 |
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| Symbol | |
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| ID | 5061071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5170939 |
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| End bp | 5172117 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476848 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001161387 |
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| Protein GI | 145597090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase
[COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00170729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGTCCGA TCCGACCCGG CGACCGTGGA CCGGCGGTCA CCGAGATCCG AAAGGTGCTG
GCCGGACTCG ACCTGCTCGT CCCGGCAGCG CCGGACAGCG ACGAGTTCGA CGCCCACACC
GAACGTGCCG TCCGAGCCTT CCAACAGTCC CGAGGGCTGA GCGTGGACGG CCGAGTCGGC
ACCGAGACGT GGCAGGCACT GGACGCGGCC CGCTGGCGGC TGGGTGCCCG TACCCTCTAC
CACTCCGTAC CGGAGCCACT CATCGGTGAG GACATCCGGT CACTCCAGGA ACGGCTCCTC
GAGATGGGCT ACGACGTGGG CCGGGCGGAT GCCATCTACG GTGTCCGAAC AGCCCGGGCC
CTCGCCCAGT TCCAACGCGA GGTGGGGCTC GCCCCGGACG GTACCTGCGG CCCCCACACC
GTGAACTCGC TCCGACGCCT CGGCCGCAAG GTGGTCGGCG GGCGCCCACA GTGGCTTCGT
GAATCCGACG CCATCCGACA GTCCGGGCCC GCCCTGGTCG GGCGGACGGT GGTCATCGAC
CCGGGACACG GCGGCAGCGA CCCGGGCGTG GCCGTGCCCG AGGGTCAGCT GCACTGGACC
GAGGCCGACC TGGTGCACGA CCTCGCCAGC CGCCTCGAGG GGCGACTCGC CGCGGCTGGG
GTACGAGTGC AGCTGACCCG TGGTCCGGCA CAGCGGGACC ACCTGCCCGA CGTTGACCGT
GCCGCCCTCG CCAACTCGCT CGGCGCGGAC GTGTTCATCT CCCTGCACCT CGACGGGCAC
GTCAACCCCG CCGCCGAGGG CGTGGCCACC TACCACTACG GAACCGACAA CGGGGTCACC
TCCACCACCG GCGAGCGCCT CGCCGGCCTC GTACAACGGG AGATCGTGGC GCGAACCGGG
CTGCGCGACT GTCGGTCCCA CGCAAAGGCA TGGGACCTCC TACGGCTGAC CCGGATGCCG
GCTGTCCGGG TCGAGGTGGG CTACCTGACC TCGCCAGCGG ACCGATCCCG GCTGATCGAC
CCACGGTTCC GGGACCGAGT GGTGGAAGCG ATTGTCGCCG CCATTCAGCG GATGTACTAC
CCGATCGAAC AGGACGTGCC CACCGGGTCG ATCGACGTGA GCAAGCTGCG GGCGATGGTG
GCCGCCGGAA CCGTGGCGGC CGGGACCGTG GTCGACTGA
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| Protein sequence | MRPIRPGDRG PAVTEIRKVL AGLDLLVPAA PDSDEFDAHT ERAVRAFQQS RGLSVDGRVG
TETWQALDAA RWRLGARTLY HSVPEPLIGE DIRSLQERLL EMGYDVGRAD AIYGVRTARA
LAQFQREVGL APDGTCGPHT VNSLRRLGRK VVGGRPQWLR ESDAIRQSGP ALVGRTVVID
PGHGGSDPGV AVPEGQLHWT EADLVHDLAS RLEGRLAAAG VRVQLTRGPA QRDHLPDVDR
AALANSLGAD VFISLHLDGH VNPAAEGVAT YHYGTDNGVT STTGERLAGL VQREIVARTG
LRDCRSHAKA WDLLRLTRMP AVRVEVGYLT SPADRSRLID PRFRDRVVEA IVAAIQRMYY
PIEQDVPTGS IDVSKLRAMV AAGTVAAGTV VD
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