| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4577 |
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| Symbol | |
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| ID | 5061067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5167553 |
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| End bp | 5168287 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640476844 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_001161383 |
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| Protein GI | 145597086 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.598832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0440159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA GCGGATCGAC CGAGCGGCCG GTGGGCGACG ACAACCCGCC AGCGACCGAG
CCCGCCTCTG ATCTCGACCT GCTGCGCGCG CACGTCGCTG GCGATCGGGA TGCCTTTGCC
GAGCTGCTTC ACCGGCACCA GGACCGGCTC TGGGCGGTGG CGCTGCGCAC CCTCGGCGAC
CGGGAGGAGG CGGCCGACGC GCTGCAGGAC GCGCTGCTCT CCGCCCATCG GGCCGCCGGA
CGGTTCCGGG GTGACTCAGC GGTAACCACC TGGCTGCACC GGATTGTGGT CAACGCCTGC
CTGGACCGGA TCCGACGCCG CCAGGCGCAC CCGACGGTGC CCCTGCCCGA CGGCGTACAC
GACGTGGCGG GTGCCACCGG CGGCGCGGAA CCGGCCGCTC CCGCGCCCGA CCACGACACC
GCTCTGGTGG TCCGGGAGGC GCTGGCCGCG CTACCGGTCG AGCAACGGGC CGCGCTGATC
CTGGTTGACG TGCAGGGCTA CCCGGTAGCC GAGGTTGCCC GCATCCTTGA TGTCGCTGAG
GGGACGGTGA AGAGCCGGTG TGCCCGGGGC CGGGCCCGTT TGGCAGCGGC GCTCGGGCAT
CTCCGGACGG CACCGGAGCA GCCGTTCCCC GGTGAAGGCA TGCCGTCCGT CACCGGACGG
AACCAGCAGC CGCGCGGTGG CGTCCGATCG GTGTCGGGGC GACCCCGGCG CGAAGCCATC
CAGGAGGAGC TGTGA
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| Protein sequence | MATSGSTERP VGDDNPPATE PASDLDLLRA HVAGDRDAFA ELLHRHQDRL WAVALRTLGD
REEAADALQD ALLSAHRAAG RFRGDSAVTT WLHRIVVNAC LDRIRRRQAH PTVPLPDGVH
DVAGATGGAE PAAPAPDHDT ALVVREALAA LPVEQRAALI LVDVQGYPVA EVARILDVAE
GTVKSRCARG RARLAAALGH LRTAPEQPFP GEGMPSVTGR NQQPRGGVRS VSGRPRREAI
QEEL
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