Gene Strop_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4576 
Symbol 
ID5061066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5165839 
End bp5167509 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content69% 
IMG OID640476843 
Productserine/threonine protein kinase 
Protein accessionYP_001161382 
Protein GI145597085 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0563383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGGG CGTCGGCGCG GGTACCGACA ACGGCCGGCC GGTTCGTGGA AGGCAGAGCG 
GAAGCCACAA TGCCCAGCAA CACGGGTCCA TCGATCGACA CGATCACCGA AGGAGGACGG
GTGCCCCAGG TCGGCGAGGG TCAGGAAGCG GACGAGAACG CCCCGCCGAT CATGACCTTC
GGTGCTCCGA TCGCCGGTGA CATACTCGCC GAGCGGTACG AGCTCGTCGA GCACATCAAC
AACGACAGCG CTGGCCGGCT GCTCTGGCGC GGGGTCGATG TCGTGTTGCG CCGTCCCGTC
GCAGTGGTGC TGCGCTACCC GGGCGGCGGC TCTGCCACCG AGATGCTCCA GGCCGCCGTC
GCCGCCAGTC GGGTCATCCA CCCCAACCTG GTCGGTGTCT ACGACGCGAT CGACGAGGGC
GAGCGGGCAT ACGTGGTCCG CGAGTGGGTC GACGGACGGT CGCTGCGGGA GCTCGTGGCC
ACCGAGGCGT TGGACCCGGC CCGGGCGACC GCCGTCGGCA ACGCCGTCGC CAGCGCCTTG
GCCGCCGTAC ACGCCACCGG AATGGTGCAC GGCAACGTCC ACCCCGGCAC GATCATGATC
AGTGATGACG GTCGGGTGGT GTTGGCGGAC GCGCGCACCG ACGGGGCCGA CAGTCAGGCC
AGCGACATCC GGGCAGTCGG CGGCGTCCTC TACTTCGCGC TGACCGGTCA CTGGCCACAT
GCCGAGGTCC CGCTACACGG CGCCACCGCC GGACACGGAC GGGCGTCGAC CCCGGACGCG
GTCCGGGGTC CGGACGGCGC GCTCGCCGCG CCGCGCCAGG TGCGCGCCGG GGTTCCGGCG
TACCTGGACG ACCTCACCAT GGATCTGCTG GACGGCTCAC TCACGCCCCC ACCGTCGGAT
GTCCTCGCCG CGGAGTTGGC CCGGCTGGAC ATCCCGGCTG ATGAGCATTT CCTGGAAAGC
AACGGCCCAC TGCGGTTCAC CGCCGAGACC GGAGACGAGC CGTCACCGCT GGCCGCGGCC
GGCGGGCGGA AGTTCGCCGT CGGGATCGCC AGCCTCCTCG CCGTCGCGCT CGTTGGCCTT
CTGATCGGCA TCAGCGTACT CAGCAAAGGT GGGGACAGCG AGCGGAACCC GGCGACGGCC
GCCGCTCCCT CTGCCAACGC GACGGCCGGT GAGGATCCAC CAGCCACCGC CGCGGCCGAA
CCGCCAAAGA TCAGCGCTGC GAAGATCATT GACCCGGACA GCGGAGATCG CGTCGAGGTC
CGCGACGCGG AGAAGGTGTT CGACGGCAGC GTGGAGGAGG GCTGGGCGAC CCAGACCTAC
CGAGGGCACC CGAATTTCGG CAATATCAAG CGCGGCATGG GAATCTGGCT CGACCTCGGT
GAGCCCCGCA CAGTCCAGTC CTTGCAGGTC CAGCTCTCGG CACGAGGCGC GTCCGCCCAG
TTGTACACGG GTACCAACGA GCACCCCTCC TCGAAGGCGG GCGACGATGC GCTCCTCGAG
GAGTACGAGA AGAACCCGAT CGGGCCGCCC AAGGAGAATG CCGACACGAC GATGGTCTTC
GACGCATTCG ACGCTGACAC GGAATACCAG TACCTGCTCT TCTGGCTGAC CGAGTTGCCG
CCGAGCGACG GCGGATACAA GGTCGGCGTC GAGGAGATCA CGGTCTCATG A
 
Protein sequence
MRRASARVPT TAGRFVEGRA EATMPSNTGP SIDTITEGGR VPQVGEGQEA DENAPPIMTF 
GAPIAGDILA ERYELVEHIN NDSAGRLLWR GVDVVLRRPV AVVLRYPGGG SATEMLQAAV
AASRVIHPNL VGVYDAIDEG ERAYVVREWV DGRSLRELVA TEALDPARAT AVGNAVASAL
AAVHATGMVH GNVHPGTIMI SDDGRVVLAD ARTDGADSQA SDIRAVGGVL YFALTGHWPH
AEVPLHGATA GHGRASTPDA VRGPDGALAA PRQVRAGVPA YLDDLTMDLL DGSLTPPPSD
VLAAELARLD IPADEHFLES NGPLRFTAET GDEPSPLAAA GGRKFAVGIA SLLAVALVGL
LIGISVLSKG GDSERNPATA AAPSANATAG EDPPATAAAE PPKISAAKII DPDSGDRVEV
RDAEKVFDGS VEEGWATQTY RGHPNFGNIK RGMGIWLDLG EPRTVQSLQV QLSARGASAQ
LYTGTNEHPS SKAGDDALLE EYEKNPIGPP KENADTTMVF DAFDADTEYQ YLLFWLTELP
PSDGGYKVGV EEITVS