Gene Strop_4567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4567 
Symbol 
ID5061057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5157750 
End bp5158544 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID640476834 
Producthypothetical protein 
Protein accessionYP_001161373 
Protein GI145597076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.266381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAGA AGGCTGGGCT GACCTTGAAA GAGGTCGGTG ACTACGTCAA CCGAAACCCC 
GGCACATTGA GCCGGATGGA GTCTGGATTC GTCGCCGCCC GCTTACCCGA GGTGCTGGCG
TACCTCGATG TCTGCGGCAT CGACGACCCC AAGCGCCGGG AAGATCTCAA GACGATGGCG
CAAGATGTCT GGCAGAAAGG CTGGTGGGAC GGGTTCACCG CCAACCTCGC TGGCGCGCTG
ATCGACTGGG TCTGGCTGGA GAGCAGGGCT ACGCACATCT ACTCGTTCGA GGTCGCTGTT
CTGCCTGGCC TGTTACAGAC CCGCGAGTAC GCCGAAGCTG TGATCCGAGC CTGGGACCAC
AGCGCCTCCA CCGCCGACAT CGACCGCTAT GTAGAGGTCA GGATGGCCCG CCAACGCAGA
CTGACTGATG CCGAACCCGT CCAGTTCTCC ACCGTCATAG ACGAGGGTGC ACTTCGCCGA
CTGGTCGGTA GTCCGGAAGT CATGCGTGCG CAACTTGCTC ACCTGCGGTC TATGGCTACC
TGGCCAAACG TTGAGATCAC GATCTTGTCT GGTCAGGCAG GCGCACATGC CAGCCCCAAC
GGTTCCTTTG ACGCCTTCCG GATGCGCCGG CCGTACCCGC CCACCGGCTG CATCGCTACT
GCCGCCGGGA GCATCGTGGT CGAGGGAGAC AAGGCGCACT CACTTTTCCA GCGCTACGAT
CGACTACGCT GCGCGGCCCT GCACAATGGC GCTGCGCAGC GGATCCTCTT TGATCTGGAA
GCACGTCTGG AGTGA
 
Protein sequence
MREKAGLTLK EVGDYVNRNP GTLSRMESGF VAARLPEVLA YLDVCGIDDP KRREDLKTMA 
QDVWQKGWWD GFTANLAGAL IDWVWLESRA THIYSFEVAV LPGLLQTREY AEAVIRAWDH
SASTADIDRY VEVRMARQRR LTDAEPVQFS TVIDEGALRR LVGSPEVMRA QLAHLRSMAT
WPNVEITILS GQAGAHASPN GSFDAFRMRR PYPPTGCIAT AAGSIVVEGD KAHSLFQRYD
RLRCAALHNG AAQRILFDLE ARLE