Gene Strop_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4566 
Symbol 
ID5061056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5156722 
End bp5157333 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID640476833 
Producthypothetical protein 
Protein accessionYP_001161372 
Protein GI145597075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.252363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTATGCGTCG CAGTGCACTT GGTATTGCTG GTCTGGCCTT CGGTGCTGGT 
GTGATGGCCA GCCCCCAGAC CTTCGACACC ACCACCGCTA CCACCCCCGC CCCCGCCACG
TCGGCGGACG CTACTGCCTC GGCGGCGGCG GTGCCGGTGG AGAAGCCGGA CATGGACACG
TTGATCCCGC ACGGCACCCA GGGTGCGCAG TCCCGGATCG ATTTGGGTGA CGAGCAGACG
GGCAACGTGA AGGCCATCAT CGAGGCCACG AAGCAGGCCG AGATGGGCGA GCGGGCCGCC
GTCGTGGCGA TCGCGACCAG TTTGCAGGAG TCGAAGCTGG AGAACCTGGG TCACCTGGGT
GCCCGTAACG ACCACGACTC GCAGGGCCTG TTCCAGCAGC GCCCGTCGTC CGGGTGGGGC
ACGGTGGAGC AGATCACCGA CCCCGAGTAC TCCACGACCG CGTTCCTGGA CGGTCTGAAG
CAGGTTGACG GTTGGCAGGA GATGCCGTTG ACCGAGGCCG CCCAGACGGT ACAGGTGTCG
GCGTACCCGT TCCACTACGC CCAGTGGGAG ACCCAGGCCG CTGACCTCGT GGCCGAGCAC
TGGACCAGCT GA
 
Protein sequence
MNTIMRRSAL GIAGLAFGAG VMASPQTFDT TTATTPAPAT SADATASAAA VPVEKPDMDT 
LIPHGTQGAQ SRIDLGDEQT GNVKAIIEAT KQAEMGERAA VVAIATSLQE SKLENLGHLG
ARNDHDSQGL FQQRPSSGWG TVEQITDPEY STTAFLDGLK QVDGWQEMPL TEAAQTVQVS
AYPFHYAQWE TQAADLVAEH WTS