Gene Strop_4551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4551 
Symbol 
ID5061041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5139614 
End bp5139985 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content70% 
IMG OID640476818 
Producthypothetical protein 
Protein accessionYP_001161357 
Protein GI145597060 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.803955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.544019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCC TCACCTGTCC CAAGTGTCAC GGCGAGATGC GCCAGTACGA ACGCAGTGGC 
GTCGTCATCG ATCAGTGCAG CGAGTGCCGG GGGATCTTCC TCGACCGCGG CGAACTGGAG
AAGCTGTTCG AGGCGGAGGC TAACTGGAAC CGGCAGCAAG CCGCTCCGGC ACCGGTCCAG
CCCAGCGGGT ACCCGCCCCA GCCTCCCCCG CAGCAGCCCG GCTACGGCAC CGTGCCGCCG
CCACCGCCGC CCACGCACGG CTACCCCCCG GCTCCGGCCC CGGCCTACGG CAGCCACGGT
CAGCACTACG GCTACCACGG GCACTACCGG CGCAAGCGGC ACAAGGGTTT CCTGGGCGAC
CTGCTCGGCT GA
 
Protein sequence
MMSLTCPKCH GEMRQYERSG VVIDQCSECR GIFLDRGELE KLFEAEANWN RQQAAPAPVQ 
PSGYPPQPPP QQPGYGTVPP PPPPTHGYPP APAPAYGSHG QHYGYHGHYR RKRHKGFLGD
LLG