| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4550 |
|---|
| Symbol | |
|---|
| ID | 5061040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 5138962 |
|---|
| End bp | 5139594 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640476817 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_001161356 |
|---|
| Protein GI | 145597059 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1926] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.554659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCT TTCGTGACCG CAACGACGCG GGTCGGGCGC TCGCCGATCG GCTCACCGCG
CTCATCGGCG AACCGGATGT CATCGTTCTT GGTCTGGTAC GCGGCGGAGT GCCCGTCGCC
GAGGTGATCG CCCGCCGGCT CGATGCCCCG CTCGACGTGA TCACCGTCCG CAAGCTCGGC
CTTCCCGGGG CGCCCGAGGT CGCGTTCGGT GCGATCGGTC CCGGTGGGGC GCAGGTGCTC
AACGAACGGA TGGCCAGCCG GCTCAGCCCG GCGGAAGTCG CCGACGTGGA CCGCCAGGAA
CGGGCCGAGC TGGATCGCCG GGAACGGCTA TACCGGGCCG ACCGCCCACC ACTGGACCTC
ACCGACCGCA CCGCCCTGAT CGTTGACGAC GGCCTCGCTA CGGGCGCCAC CGCCCGCGCC
GCGGTCCAGG TCGCCCGCCA CCTCGGTGCC CGCCGGGTGG TGGCGGCGGC CCCGGTCGGC
TCACAGGAGG CGTACGAGCT ACTCTCCGCC GAGGCCGACC AGGTTGTCTG CCCGCAGCAC
CCGACCGACT TCACCGCGGT CAGCGCCTAC TACGACGACT TCCACGAGGT CTCCGACGAC
GAGGTGACCG CCATGTTGAC CGCGACCGCT TAG
|
|---|
| Protein sequence | MTTFRDRNDA GRALADRLTA LIGEPDVIVL GLVRGGVPVA EVIARRLDAP LDVITVRKLG
LPGAPEVAFG AIGPGGAQVL NERMASRLSP AEVADVDRQE RAELDRRERL YRADRPPLDL
TDRTALIVDD GLATGATARA AVQVARHLGA RRVVAAAPVG SQEAYELLSA EADQVVCPQH
PTDFTAVSAY YDDFHEVSDD EVTAMLTATA
|
|---|
| |