Gene Strop_4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4544 
Symbol 
ID5061034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5132519 
End bp5133064 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID640476811 
ProductDoxX family protein 
Protein accessionYP_001161350 
Protein GI145597053 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.573172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG TACGCTCCCT CGCCCGAGTA ATGCTCAGTG GCATTCTCGT GGTCGAGGGG 
GCCCGCAGCC TCGCCGCCCC GGGCCGGCTC GCCCCCGCCG CCACACCGAT GACCGACCGG
GTCGCACCCC TGCTGCGACG AGCTGTTCCC GGCGTTCCCA CCGACACCGA GACGCTGGTC
CGCGCCAATG GAGCCGTGCA GTTCGGTGCC GGCCTCCTGC TCGCCACCGG ACGACTCACC
CGACCGGCGG CCTTGGTTCT GGCCGGCACT CTGGTGCCGG GTACTATTGC CGAGCATCCC
TTCTGGACTG ACACGGATCC GGCGTTGCGG GTCAACAACC AACTGCACTT CCTGAAAAAC
CTCGGCCTCT TCGGTGGGCT GCTGCTGGCC GCCGCAGACA CCGAAGGAAA GCCAGGGCTA
CGCTGGCGGG CCGGTCAGCG GCTCGACCAC TCCCAGCGTT GGGCAACGCG AGCTGTCCGT
ACCGCCCGCC GACAGGCCCG GATCGCCGTA CGATCGGCAG CGACGGCTCG ACGTTTCCCT
GGCTGA
 
Protein sequence
MTPVRSLARV MLSGILVVEG ARSLAAPGRL APAATPMTDR VAPLLRRAVP GVPTDTETLV 
RANGAVQFGA GLLLATGRLT RPAALVLAGT LVPGTIAEHP FWTDTDPALR VNNQLHFLKN
LGLFGGLLLA AADTEGKPGL RWRAGQRLDH SQRWATRAVR TARRQARIAV RSAATARRFP
G