| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4526 |
|---|
| Symbol | |
|---|
| ID | 5061016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 5114143 |
|---|
| End bp | 5114760 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161332 |
|---|
| Protein GI | 145597035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.99956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCCA TGACCGAAGC GCAGTCCGCA GGACAGAACG ACGTGCAGGA CCAGGCTGAC
GAGCAGGGCC AGGACGATGC TGCTCGGACC GGCACCGTGG TGGTGGTGGG ACCGGACGGC
CGTCCAGTCG GCACGGTGCA GACCGACGAG AGCCAGGAGG ACCCGGCTCG ACTGGTCGAG
CAGCCTGCCA AGGTGATGCG GATCGGCAGC ATGATCAAGC AGCTGTTGGA AGAGGTCAAG
GCCGCCCCGC TCGACGACGC CAGCCGGCAC CGGATGCGGG AGATCCATGA GCGGTCCATC
GTCGAGCTCA AGGAGGGGCT CGCCGTTGAG CTGCGGGAGG AGTTGGAGCG CCTCGCCCTG
CCCTTCACCG AGGAGAAGGC GCCCAGCGAG AGCGAGTTGC GGATCGCCCA TGCGCAGCTT
GTTGGCTGGC TGGAAGGGCT CTTCCACGGC ATCCAGGCGG CCTTGGTCGC CCAGCAGATG
GCGGCCCGGG TGCAGCTGGA GCAGATGCGC TCCGGTCGGC AGGCACTCCC CAGCGGGCCG
GGCGGAATCG CGCCCGGCAT GCCCGGGATG GGGCAGGCGG CGGGCGGCGA GGGGCACGGT
ACCGGTCAGT ACCTCTGA
|
|---|
| Protein sequence | MGAMTEAQSA GQNDVQDQAD EQGQDDAART GTVVVVGPDG RPVGTVQTDE SQEDPARLVE
QPAKVMRIGS MIKQLLEEVK AAPLDDASRH RMREIHERSI VELKEGLAVE LREELERLAL
PFTEEKAPSE SELRIAHAQL VGWLEGLFHG IQAALVAQQM AARVQLEQMR SGRQALPSGP
GGIAPGMPGM GQAAGGEGHG TGQYL
|
|---|
| |