Gene Strop_4523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4523 
Symbol 
ID5061013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5111855 
End bp5112199 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content65% 
IMG OID640476790 
Producthypothetical protein 
Protein accessionYP_001161329 
Protein GI145597032 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.925489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGA ACCGGGAGCG GTTCGAGGAG CTGGTTGGTG ACGCGCTCGA CGAGGTACCC 
GAGGAGTTGC TCAGCCTGAT GAGCAACGTG GTCATCCTGG TCGAGGACGC CCCACCCCCC
GGCGAGGAGC TACTCGGCCT GTACGAGGGG CACGCCCTGA CCGACCGCGG CTGGGACTAC
TCGGGAGTGC TACCCGACCG CATCCTGATC TACCGCAACC CGATCCTGCG TATCTGCGAC
ACCGAGGAGG AGGTGGTCGA GGAGGTGGCG ATCACGGTCG TGCACGAGAT CGCCCACCAC
TTCGGCATTG ACGACGACCG TCTACACGAG TTGGGCTGGG GTTGA
 
Protein sequence
MEMNRERFEE LVGDALDEVP EELLSLMSNV VILVEDAPPP GEELLGLYEG HALTDRGWDY 
SGVLPDRILI YRNPILRICD TEEEVVEEVA ITVVHEIAHH FGIDDDRLHE LGWG