Gene Strop_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4520 
Symbol 
ID5061010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5109778 
End bp5110182 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID640476787 
Producthypothetical protein 
Protein accessionYP_001161326 
Protein GI145597029 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA TCGCTCTGCT GCCGGGTGAT TACGCTGTCT GCCGTCTGGC AGCCGGCTCT 
GCCCTGCCGC CCAGCCTGTC GGGCGGGCTG AGCGACGATG ACGTGGTCAC GGTGAGCTGG
ACCACCGACG GCGTGTCGGT GATCTGTCCC GCAGCACGCG CACCGGCACA GACCGAGACC
ACCTGGCGTT GCCTACGCAT GGTCGGCCCC TCTGACCTCG CGCTCTCCAC CGGCCTGGCT
GCCCTCATCG ACCCGCTGGC CGAGGCCCGC GTCTCCGTGG TCGCCTTCTC CACCCACGAC
ACCGACTATC TGCTGGTCCC GGCTGTCCGC CTCGATCAGG CCGTCGCGGC GCTCGACCGG
GCCGGGCACC GCGTCCGCAC CCAGCCAGGG CCGATGTCGC GTTGA
 
Protein sequence
MLDIALLPGD YAVCRLAAGS ALPPSLSGGL SDDDVVTVSW TTDGVSVICP AARAPAQTET 
TWRCLRMVGP SDLALSTGLA ALIDPLAEAR VSVVAFSTHD TDYLLVPAVR LDQAVAALDR
AGHRVRTQPG PMSR