Gene Strop_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4501 
Symbol 
ID5060991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5090985 
End bp5092667 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content73% 
IMG OID640476768 
Producthypothetical protein 
Protein accessionYP_001161307 
Protein GI145597010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.610631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.263243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG CAGTAACCGG CGCGGCGACA GTCCGGCCGG TCCGTGCCCG GCACTTCGTC 
CGCCTCAAGC TGCGCGTGTT GGGCAACAAC TTTCGGGGCC AGGGCTGGCG GGTCGGCCTC
TTCGCGCTCG GTGCGTTCGT GGCACTCTGG TGCGCCGCCT TCGGCTTCTT TCTCTTCGCT
GCCCCGGGCC TCGCCGACAA CGGCCAGTAC GCGACGCTGC TGGCGGCCTT CGGTGGTGGG
CTGGTGGTAC TGGGCTGGCT CGTGCTGCCG CTGATCTTCT TCGGGGTAGA CGAGACGCTG
GATCCGGCCC GGTTCGCGCT GCTTCCGCTG CCCCGTCGGA CGCTGGTCAC CGGCCTCTTC
GCGGCAGCGC TGGTCAGCGT TCCGGCGGTC GCCGTACTGC TGGCCTCCAC CGGTTTGATC
CTCACCGCCG GCACCTTCGG CGGATGGTCG GCCGCCCTCA CACAGGCAGT CGGGGTGCTG
GCCGGGCTGC TGCTCTGCGT CGCCGCTGCC CGCGCCGTCA CCAGTGCCTT CGCCACGATG
CTGCGCTCTC GTCGGGTCCG CGACCTGGCC GCGGTCCTGC TGGCTGGGGC CGCCGCCGTG
ATCGCGCCGG TGCAGCTGGC CGCCATCGCC GCGCTGCGGG ACGCGGACTG GGACCGGCTC
GCCGCGGTGG CGGCCGTGGT CGGCTGGACA CCGCTCGGCG CGCCGTGGAC GATCGGCATC
GACGTCGCGC AGGGACGGGT CTGGGCCGCA CCGGCGAAGC TGCTGATCAC GGCACTGACC
GTGGTGGCGC TGCTGGCCTG GTGGTCTCGC TCGCTGGAGT CGGCGATGGT CGGCACCGTG
AGCAGCGGCC GGGCGTCGAC CCGGCCGAGT GCGACCGGCA CCGCCGTCAC ACAGCTCTTC
CCTCGCCTGC TGAGCTGGCT CCCCCGGGGC CGCTTCGGCG CGCTGGTGGC ACGGGAGGCG
CGGTACTGGT GGCGGGACGC CCGCCGGCGG GCAAACCTGA TCACACTGGC CGTGGTCGGC
CTGTTCGTCC CGGTCATGCT GAATGTCGGC AGCGCCGGTC TCACCGGGGA CACCGGCGGG
GGCGCCCCGG AAACCTCGTC CCCGGTCTTG GTCAGTCTCT CGATGGTCTT CGTCGGGGTG
CTCGCCGCCG TCACCCTGGC CAACCAGTTC GGCTTCGACG GCAGCGCGTA CGCGGCGCAC
GTGGTCGTGG GGGTGCCGGG CGCGGTGGAG CTGCGGGCCC GGATGGCGGC GTTCTCGCTC
TACCTCCTAC CCCTGGTGGT GATCATCTCC GGGGTGCTCG CCCTGCTCTT GGGTCGGCCG
GGTTGGATCG GTCTCACAGC GGGGAGCCTG CTCGCCACCT ACGGTGCCGG GCTCGCGGTC
AACACCCTGC TGTCGGTGCT CGGGGCGTAT TCGCTGCCCG AGACGAGCAA CCCGTTCGCG
TTGAACAGCG GCGCCGGGGT GGCCCGCAGC TCCCTGGCCA TCCTGTCCAT GCTCGCCTCG
GCGGTCGCGG TGCTCCCGAT GGTGGTGGCC GCCGCGCTGC TCGGTGATAT CTGGCTCTGG
CTGGCCCTGC CGGTCGGCAC GGCGTACGGG CTGGGTGCGG CGCTGCTCGG CGCTCACCTG
GCCGGCGACG TGCTGGACCA CCGCCAGCCC GAACTCCTGA CAACCGTCAC GCCCCGCCGC
TGA
 
Protein sequence
MAVAVTGAAT VRPVRARHFV RLKLRVLGNN FRGQGWRVGL FALGAFVALW CAAFGFFLFA 
APGLADNGQY ATLLAAFGGG LVVLGWLVLP LIFFGVDETL DPARFALLPL PRRTLVTGLF
AAALVSVPAV AVLLASTGLI LTAGTFGGWS AALTQAVGVL AGLLLCVAAA RAVTSAFATM
LRSRRVRDLA AVLLAGAAAV IAPVQLAAIA ALRDADWDRL AAVAAVVGWT PLGAPWTIGI
DVAQGRVWAA PAKLLITALT VVALLAWWSR SLESAMVGTV SSGRASTRPS ATGTAVTQLF
PRLLSWLPRG RFGALVAREA RYWWRDARRR ANLITLAVVG LFVPVMLNVG SAGLTGDTGG
GAPETSSPVL VSLSMVFVGV LAAVTLANQF GFDGSAYAAH VVVGVPGAVE LRARMAAFSL
YLLPLVVIIS GVLALLLGRP GWIGLTAGSL LATYGAGLAV NTLLSVLGAY SLPETSNPFA
LNSGAGVARS SLAILSMLAS AVAVLPMVVA AALLGDIWLW LALPVGTAYG LGAALLGAHL
AGDVLDHRQP ELLTTVTPRR