Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4501 |
Symbol | |
ID | 5060991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5090985 |
End bp | 5092667 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640476768 |
Product | hypothetical protein |
Protein accession | YP_001161307 |
Protein GI | 145597010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.610631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.263243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTCG CAGTAACCGG CGCGGCGACA GTCCGGCCGG TCCGTGCCCG GCACTTCGTC CGCCTCAAGC TGCGCGTGTT GGGCAACAAC TTTCGGGGCC AGGGCTGGCG GGTCGGCCTC TTCGCGCTCG GTGCGTTCGT GGCACTCTGG TGCGCCGCCT TCGGCTTCTT TCTCTTCGCT GCCCCGGGCC TCGCCGACAA CGGCCAGTAC GCGACGCTGC TGGCGGCCTT CGGTGGTGGG CTGGTGGTAC TGGGCTGGCT CGTGCTGCCG CTGATCTTCT TCGGGGTAGA CGAGACGCTG GATCCGGCCC GGTTCGCGCT GCTTCCGCTG CCCCGTCGGA CGCTGGTCAC CGGCCTCTTC GCGGCAGCGC TGGTCAGCGT TCCGGCGGTC GCCGTACTGC TGGCCTCCAC CGGTTTGATC CTCACCGCCG GCACCTTCGG CGGATGGTCG GCCGCCCTCA CACAGGCAGT CGGGGTGCTG GCCGGGCTGC TGCTCTGCGT CGCCGCTGCC CGCGCCGTCA CCAGTGCCTT CGCCACGATG CTGCGCTCTC GTCGGGTCCG CGACCTGGCC GCGGTCCTGC TGGCTGGGGC CGCCGCCGTG ATCGCGCCGG TGCAGCTGGC CGCCATCGCC GCGCTGCGGG ACGCGGACTG GGACCGGCTC GCCGCGGTGG CGGCCGTGGT CGGCTGGACA CCGCTCGGCG CGCCGTGGAC GATCGGCATC GACGTCGCGC AGGGACGGGT CTGGGCCGCA CCGGCGAAGC TGCTGATCAC GGCACTGACC GTGGTGGCGC TGCTGGCCTG GTGGTCTCGC TCGCTGGAGT CGGCGATGGT CGGCACCGTG AGCAGCGGCC GGGCGTCGAC CCGGCCGAGT GCGACCGGCA CCGCCGTCAC ACAGCTCTTC CCTCGCCTGC TGAGCTGGCT CCCCCGGGGC CGCTTCGGCG CGCTGGTGGC ACGGGAGGCG CGGTACTGGT GGCGGGACGC CCGCCGGCGG GCAAACCTGA TCACACTGGC CGTGGTCGGC CTGTTCGTCC CGGTCATGCT GAATGTCGGC AGCGCCGGTC TCACCGGGGA CACCGGCGGG GGCGCCCCGG AAACCTCGTC CCCGGTCTTG GTCAGTCTCT CGATGGTCTT CGTCGGGGTG CTCGCCGCCG TCACCCTGGC CAACCAGTTC GGCTTCGACG GCAGCGCGTA CGCGGCGCAC GTGGTCGTGG GGGTGCCGGG CGCGGTGGAG CTGCGGGCCC GGATGGCGGC GTTCTCGCTC TACCTCCTAC CCCTGGTGGT GATCATCTCC GGGGTGCTCG CCCTGCTCTT GGGTCGGCCG GGTTGGATCG GTCTCACAGC GGGGAGCCTG CTCGCCACCT ACGGTGCCGG GCTCGCGGTC AACACCCTGC TGTCGGTGCT CGGGGCGTAT TCGCTGCCCG AGACGAGCAA CCCGTTCGCG TTGAACAGCG GCGCCGGGGT GGCCCGCAGC TCCCTGGCCA TCCTGTCCAT GCTCGCCTCG GCGGTCGCGG TGCTCCCGAT GGTGGTGGCC GCCGCGCTGC TCGGTGATAT CTGGCTCTGG CTGGCCCTGC CGGTCGGCAC GGCGTACGGG CTGGGTGCGG CGCTGCTCGG CGCTCACCTG GCCGGCGACG TGCTGGACCA CCGCCAGCCC GAACTCCTGA CAACCGTCAC GCCCCGCCGC TGA
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Protein sequence | MAVAVTGAAT VRPVRARHFV RLKLRVLGNN FRGQGWRVGL FALGAFVALW CAAFGFFLFA APGLADNGQY ATLLAAFGGG LVVLGWLVLP LIFFGVDETL DPARFALLPL PRRTLVTGLF AAALVSVPAV AVLLASTGLI LTAGTFGGWS AALTQAVGVL AGLLLCVAAA RAVTSAFATM LRSRRVRDLA AVLLAGAAAV IAPVQLAAIA ALRDADWDRL AAVAAVVGWT PLGAPWTIGI DVAQGRVWAA PAKLLITALT VVALLAWWSR SLESAMVGTV SSGRASTRPS ATGTAVTQLF PRLLSWLPRG RFGALVAREA RYWWRDARRR ANLITLAVVG LFVPVMLNVG SAGLTGDTGG GAPETSSPVL VSLSMVFVGV LAAVTLANQF GFDGSAYAAH VVVGVPGAVE LRARMAAFSL YLLPLVVIIS GVLALLLGRP GWIGLTAGSL LATYGAGLAV NTLLSVLGAY SLPETSNPFA LNSGAGVARS SLAILSMLAS AVAVLPMVVA AALLGDIWLW LALPVGTAYG LGAALLGAHL AGDVLDHRQP ELLTTVTPRR
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