| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4499 |
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| Symbol | |
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| ID | 5060989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5089616 |
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| End bp | 5090140 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476766 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001161305 |
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| Protein GI | 145597008 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0276356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.127019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCGA GAAGGGAGGC CGTGGTGAAT GCGGAAGACA GTTTTGAGGA GTTCTACCGC
AGCACTCGAC ATCGCGTCGT CACAGTGCTC TACGCACTGG GCGGGGACCT GGGTGAGGCT
CAGGACGCCG CCCAAGAGGC GTACGTGCGG GCCTGGCAGC GCTGGTCGAA GATCAGCGCG
TACGACGACG CCGAGGCATG GGTACGAACC GTCGGGTATC GGCTGTTGGT GAATCGCTGG
CGCAAGATTC GTAATGGTTT GTCCGCATAT CGCCGACACG GTGCGGATTC GGCCACCGGA
CCGCCGTCAG AGGACACCGT GGCGCTGGTC GCGGCGCTGC GACGGCTGCC AGCCGAGCAG
CGGCAGGCGG TTGTCCTGCA CCACCTGGCG GATCTGTCCG TCCTGGACAT CTCCAAGCAG
ACAGGTACGC CGACGGGCAC CGTCAAAGCC CGTCTCGCCC GTGGGCGAAA AGCCCTCGCC
GTCCTTCTTG ACACCTCGTT TCCGGAGGAG GTCAGTCATG CCTGA
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| Protein sequence | MEPRREAVVN AEDSFEEFYR STRHRVVTVL YALGGDLGEA QDAAQEAYVR AWQRWSKISA
YDDAEAWVRT VGYRLLVNRW RKIRNGLSAY RRHGADSATG PPSEDTVALV AALRRLPAEQ
RQAVVLHHLA DLSVLDISKQ TGTPTGTVKA RLARGRKALA VLLDTSFPEE VSHA
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