Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4492 |
Symbol | |
ID | 5060982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5082174 |
End bp | 5083736 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476759 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_001161298 |
Protein GI | 145597001 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.348554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAA GCCTCCAGCG CCCGGTAACC AACGGAGGCC GGAGCAGAAC CGTGCGGCAC GTCGACAGCT TCGAAATCCA GCCGCCGACA CCGCCGTCCC ACAACGGCGT ACCTCGGTCG GCCTGGGCCC GCAGCCACCG CCGGGTCTCC CGTTGGCACC GCCCCTACAC CGCGCTCCTG GTTCTGCTGG ACTTCGCCGC CGCCGCCTTC GCGAGCTTCA CCGCTATCCG CGCCTTCGAC CAGGCGCGGG CCGGGTTCTA CAACGATCCG GCCTGGTTCT ACACCCTGGC ATGCGTGCTG CTGCCGCTCG GCTGGGTGGT GATCCTCTGG TTCAACGGCT CCTACGATCG GCGGTACCTG GGCCTCGGCC CGGATGAGTT CAAGCGTGTT CTCCGCGCCG GCGTGGCGGT CTGCGCGACG GTCTCCTTCC TGGCGTTCGC CACCAAGACC GACCTGTCCC GATATTCGGT CGGAACCGCG TTACTCCTCG CTCTGCTGCT GATCCTCCTG GTCCGGATCC TGGCCCGATT CGTGCTGCAC GTGATCCGGC GCAACGCCGG CCGGGCCGGC CTGGCCGGCC ACCGAATGGT CCTGGTAGGC ACCCTGCCGG AGTGCCTGGA GGTCCACCGC CAGGTCACCC GCAGCCCCGC CGCCGGCCTG GTGCCGGTCG CCATCCACAT CACCGACGGC TACGCGGCTG CCCGGGGTGT GGAGACCCCG GTCCCGGTCT ACGCGGGGCG CGACCTCCTC GCCCTGGTTC GCGAGGTCGG CGGCGACACG ATCGCGGTCT GCGGGTCGGC CAGCGCCGAG CCCGGCGAGC TGCGCCGGAT GGCCTGGCAG CTCGAAGGCT CCGGAGTCGA TCTGGCCGTG GTCCCGCAGC TGACCGACAT CGCCGGGCCC CGGGTACACA TCCGGCCGAT CGAGGGCCTG CCGCTGCTGC ACGTGGAGGA GCCGACCCTC TCCGGTCCGG CGCTGCTGGC GAAGAATCTG CTCGACCGGG TGGCCGCCGG CCTCGGCCTG CTGATCCTGC TACCGGTCTT CCTCGCGATC GCGATCTCGA TCCGGATCTC CGACCGGGGT CCGGTCTTCT TCCGGCAGCC CCGGGTGGGC CACGAGGGGC GAACCTTCCG GGTCTGGAAG TTCCGCACCA TGTACGTGGA TGCCGAGGAG CGGCTGGCCA GCCTGGTTGA CCAGAACGAG ACCGACGGCA TGCTGTTCAA GATGAGGCGG GACCCGCGGG TCTTCCCGGT GGGCCGCTTC CTGCGCGCCT CGTCCCTGGA TGAGCTGCCC CAGCTGATCA ACGTGCTGAA GGGTGAGATG TCGCTGGTCG GGCCCCGCCC GCTGCCCGCC GACGACGGTG ACTTCCTCGG CGACGTACGC CGGCGCCTCC TGGTCAAACC TGGAATTACC GGCCTCTGGC AGGTCTCCGG CCGCTCTGAC CTCTCCTGGG ACGAGGCGGT CCGCCTTGAC CTCTACTACG TCGACAACTG GTCGTTGGCG TACGACCTGA GCATCCTGTG GCGCACGGTC GGCGTGGTGC TCGCCCGCAA GGGCGCGTAC TAG
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Protein sequence | MTTSLQRPVT NGGRSRTVRH VDSFEIQPPT PPSHNGVPRS AWARSHRRVS RWHRPYTALL VLLDFAAAAF ASFTAIRAFD QARAGFYNDP AWFYTLACVL LPLGWVVILW FNGSYDRRYL GLGPDEFKRV LRAGVAVCAT VSFLAFATKT DLSRYSVGTA LLLALLLILL VRILARFVLH VIRRNAGRAG LAGHRMVLVG TLPECLEVHR QVTRSPAAGL VPVAIHITDG YAAARGVETP VPVYAGRDLL ALVREVGGDT IAVCGSASAE PGELRRMAWQ LEGSGVDLAV VPQLTDIAGP RVHIRPIEGL PLLHVEEPTL SGPALLAKNL LDRVAAGLGL LILLPVFLAI AISIRISDRG PVFFRQPRVG HEGRTFRVWK FRTMYVDAEE RLASLVDQNE TDGMLFKMRR DPRVFPVGRF LRASSLDELP QLINVLKGEM SLVGPRPLPA DDGDFLGDVR RRLLVKPGIT GLWQVSGRSD LSWDEAVRLD LYYVDNWSLA YDLSILWRTV GVVLARKGAY
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