Gene Strop_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4486 
Symbol 
ID5060976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5076675 
End bp5077064 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content70% 
IMG OID640476753 
ProductCBS domain-containing protein 
Protein accessionYP_001161292 
Protein GI145596995 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0214678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTC GGGAAGTGAT GTCCAGCCAG GTTCTGGTGG TCGGCCCGGA GCACACGCTC 
CGGCAGGCGG CGCGAATGAT GTCGGAGCGG GGCATCGGGT CGGCAGTCGT GATCGATCCG
GATTCCGAAG GGGTCGGGAT CATGACCGAG CGGGATCTGC TCAACGCGAT CGGGCGCGGG
TTGGACTGTG ACGTCGAGCG GACCGGGGCC CACCTGACCT GGGACGTGGT GTACGCGGGG
CCGGAGTGGA CGGTCGAGGA GGCGGCGACC GCGATGGCCC GGGGCGGGTT TCGGCACCTG
GTGGTGCTCG ACGGGCGCGA GGTGGCCGGG GTCATCTCGC TCCGTGATGT CGTCCGGGTC
TGGGCGACCG AACGGGTCGC CCCCGGGTGA
 
Protein sequence
MQVREVMSSQ VLVVGPEHTL RQAARMMSER GIGSAVVIDP DSEGVGIMTE RDLLNAIGRG 
LDCDVERTGA HLTWDVVYAG PEWTVEEAAT AMARGGFRHL VVLDGREVAG VISLRDVVRV
WATERVAPG