Gene Strop_4483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4483 
Symbol 
ID5060973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5073282 
End bp5074211 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content74% 
IMG OID640476750 
Producthypothetical protein 
Protein accessionYP_001161289 
Protein GI145596992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00510838 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGAAGG GACAACTCCC AGGAGGTGGG ACCGTGTTTG GAAACGGGCG GCGTAAGACC 
CAGGGCCAGC TTGCCAAGAT CGAACTAAGT CGGGGCTTCG GTCACCTGAA GCGGGCGGCA
GGGCACGCGA CCAACGGCAC CGGCGCCACG GTCGGCCCCC GGGTGCGGGC GGCCCAAAGC
GCTGTCGCCC CGACCGCGCT GGTCGTGCGG GACCGGGCGG CGAGCGGCTA CGTGTCGACC
GTGGCGGCTC TCGCGCCGCT GGCCATCGCC GTTCGATCCG CCCAGGCGGA GGCGGCCGGC
CGGGCCGTCG CCGGACGGAG CGCCGCCGCC GTCAAGCCGG CCACCACCGG CAAGAAGACG
CAGGCGAAGA AGGCGCGGGC GAGGCGCGCG AAGAAGAGGT CCGGTCGGGG CAGGATGGCC
GGCCTGCTGA CGGCTGGCGC CGTGGTCGGG TTGGTCGGCG CCGTGGCGTT GCGACGCCGC
TACGAGCGGC GGGAGTGGGT CGAGTACGAC CCGGTCCCCA GCCTGGAGCC GATGCAGGCC
GAGATGGACA CCATCGAGGT CACCACCCGG ACCCCCGCCG AGCAGACCGC CCCGGCGGCA
TCGACCGCGA ACGCGGATGC CGCCACACCG GCGGGCTCGG CGAGCGACGC GGCAACCGGT
GGCACCACAA CCAGTGGCAC GAGCGGCAAA GCGGCGGGCG GCGGCACGGC AACGGGTGGC
ACGAGCGGCA AAGCGGCGGG CGGCACCGCC AAGACCAACT CGGGCCGGCG GTCCGGCGCG
ACGCCGACCG ACAAGGTCCC CGCAACGCCG ACCGACAAGG TCCCCGCAAC GCCGGCCGAC
AAGGTCCCCG CAACGACCGA GGGCACCAGG AACTCCGCCG GCCGCCCGAC CAACGACCTC
TCCAAGGCAA TGAAGAACGG TCGCCACTGA
 
Protein sequence
MTKGQLPGGG TVFGNGRRKT QGQLAKIELS RGFGHLKRAA GHATNGTGAT VGPRVRAAQS 
AVAPTALVVR DRAASGYVST VAALAPLAIA VRSAQAEAAG RAVAGRSAAA VKPATTGKKT
QAKKARARRA KKRSGRGRMA GLLTAGAVVG LVGAVALRRR YERREWVEYD PVPSLEPMQA
EMDTIEVTTR TPAEQTAPAA STANADAATP AGSASDAATG GTTTSGTSGK AAGGGTATGG
TSGKAAGGTA KTNSGRRSGA TPTDKVPATP TDKVPATPAD KVPATTEGTR NSAGRPTNDL
SKAMKNGRH